MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NZ_CP082200 Location: 1842014..1885241 Organism: Streptococcus suis strain Transconjugant cDY107 Replicon: chromosome
Accession: NZ_CP082200 Location: 1842014..1885241 Organism: Streptococcus suis strain Transconjugant cDY107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6971_RS09050 (K6971_09050) | 1837956..1841075 | + | 3120 | WP_012775354.1 | DUF6359 domain-containing protein | - |
| K6971_RS09055 (K6971_09055) | 1841155..1842021 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| K6971_RS09060 (K6971_09060) | 1842014..1843018 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| K6971_RS09065 (K6971_09065) | 1843164..1843937 | - | 774 | WP_012027854.1 | NUDIX domain-containing protein | - |
| K6971_RS09070 (K6971_09070) | 1843930..1844751 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| K6971_RS09075 (K6971_09075) | 1844761..1845798 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| K6971_RS09080 (K6971_09080) | 1845912..1848365 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| K6971_RS09085 (K6971_09085) | 1848371..1848829 | - | 459 | WP_012027859.1 | CtsR family transcriptional regulator | - |
| K6971_RS09090 (K6971_09090) | 1848979..1849317 | + | 339 | WP_012027860.1 | thioredoxin domain-containing protein | - |
| K6971_RS09095 (K6971_09095) | 1849317..1850018 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| K6971_RS09100 (K6971_09100) | 1850281..1851321 | - | 1041 | WP_012027862.1 | translation elongation factor Ts | - |
| K6971_RS09105 (K6971_09105) | 1851477..1852253 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| K6971_RS09110 (K6971_09110) | 1852600..1853112 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| K6971_RS09120 (K6971_09120) | 1853766..1858844 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| K6971_RS09125 (K6971_09125) | 1858988..1859527 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| K6971_RS09130 (K6971_09130) | 1859637..1859813 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| K6971_RS09135 (K6971_09135) | 1859823..1859975 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| K6971_RS09140 (K6971_09140) | 1860009..1862222 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| K6971_RS09145 (K6971_09145) | 1862375..1863343 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| K6971_RS09150 (K6971_09150) | 1863345..1864211 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| K6971_RS09155 (K6971_09155) | 1864238..1865050 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| K6971_RS09160 (K6971_09160) | 1865152..1866018 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| K6971_RS09165 (K6971_09165) | 1866018..1866959 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| K6971_RS09170 (K6971_09170) | 1866949..1868187 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| K6971_RS09175 (K6971_09175) | 1868188..1868820 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| K6971_RS09180 (K6971_09180) | 1868813..1869472 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| K6971_RS09185 (K6971_09185) | 1869487..1870362 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| K6971_RS09195 (K6971_09195) | 1871259..1872836 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein | - |
| K6971_RS09200 (K6971_09200) | 1872833..1874074 | - | 1242 | WP_014636518.1 | radical SAM protein | - |
| K6971_RS09205 (K6971_09205) | 1874443..1875306 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| K6971_RS09210 (K6971_09210) | 1875796..1878240 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| K6971_RS09215 (K6971_09215) | 1878253..1879983 | - | 1731 | WP_012775361.1 | membrane protein | - |
| K6971_RS09220 (K6971_09220) | 1880348..1881220 | - | 873 | WP_012775362.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| K6971_RS09225 (K6971_09225) | 1881240..1881770 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| K6971_RS09230 (K6971_09230) | 1881784..1882041 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| K6971_RS09235 (K6971_09235) | 1882043..1882303 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K6971_RS09240 (K6971_09240) | 1882379..1882834 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| K6971_RS09245 (K6971_09245) | 1882841..1883170 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6971_RS09250 (K6971_09250) | 1883160..1883447 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| K6971_RS09255 (K6971_09255) | 1883545..1883913 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| K6971_RS09260 (K6971_09260) | 1883906..1884475 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| K6971_RS09265 (K6971_09265) | 1884459..1885241 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| K6971_RS09270 (K6971_09270) | 1885348..1885485 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| K6971_RS09275 (K6971_09275) | 1885653..1886648 | - | 996 | WP_012775367.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| K6971_RS09280 (K6971_09280) | 1886668..1887480 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| K6971_RS09285 (K6971_09285) | 1887464..1887823 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| K6971_RS09290 (K6971_09290) | 1887894..1889288 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |