MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NZ_CP082197 Location: 1839769..1882996 Organism: Streptococcus suis strain Transconjugant cSS389 Replicon: chromosome
Accession: NZ_CP082197 Location: 1839769..1882996 Organism: Streptococcus suis strain Transconjugant cSS389 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6975_RS08970 (K6975_08970) | 1835711..1838830 | + | 3120 | WP_012775354.1 | DUF6359 domain-containing protein | - |
| K6975_RS08975 (K6975_08975) | 1838910..1839776 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| K6975_RS08980 (K6975_08980) | 1839769..1840773 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| K6975_RS08985 (K6975_08985) | 1840919..1841692 | - | 774 | WP_012027854.1 | NUDIX domain-containing protein | - |
| K6975_RS08990 (K6975_08990) | 1841685..1842506 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| K6975_RS08995 (K6975_08995) | 1842516..1843553 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| K6975_RS09000 (K6975_09000) | 1843667..1846120 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| K6975_RS09005 (K6975_09005) | 1846126..1846584 | - | 459 | WP_012027859.1 | CtsR family transcriptional regulator | - |
| K6975_RS09010 (K6975_09010) | 1846734..1847072 | + | 339 | WP_012027860.1 | thioredoxin domain-containing protein | - |
| K6975_RS09015 (K6975_09015) | 1847072..1847773 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| K6975_RS09020 (K6975_09020) | 1848036..1849076 | - | 1041 | WP_012027862.1 | translation elongation factor Ts | - |
| K6975_RS09025 (K6975_09025) | 1849232..1850008 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| K6975_RS09030 (K6975_09030) | 1850355..1850867 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| K6975_RS09040 (K6975_09040) | 1851521..1856599 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| K6975_RS09045 (K6975_09045) | 1856743..1857282 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| K6975_RS09050 (K6975_09050) | 1857392..1857568 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| K6975_RS09055 (K6975_09055) | 1857578..1857730 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| K6975_RS09060 (K6975_09060) | 1857764..1859977 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| K6975_RS09065 (K6975_09065) | 1860130..1861098 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| K6975_RS09070 (K6975_09070) | 1861100..1861966 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| K6975_RS09075 (K6975_09075) | 1861993..1862805 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| K6975_RS09080 (K6975_09080) | 1862907..1863773 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| K6975_RS09085 (K6975_09085) | 1863773..1864714 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| K6975_RS09090 (K6975_09090) | 1864704..1865942 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| K6975_RS09095 (K6975_09095) | 1865943..1866575 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| K6975_RS09100 (K6975_09100) | 1866568..1867227 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| K6975_RS09105 (K6975_09105) | 1867242..1868117 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| K6975_RS09115 (K6975_09115) | 1869014..1870591 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein | - |
| K6975_RS09120 (K6975_09120) | 1870588..1871829 | - | 1242 | WP_014636518.1 | radical SAM protein | - |
| K6975_RS09125 (K6975_09125) | 1872198..1873061 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| K6975_RS09130 (K6975_09130) | 1873551..1875995 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| K6975_RS09135 (K6975_09135) | 1876008..1877738 | - | 1731 | WP_012775361.1 | membrane protein | - |
| K6975_RS09140 (K6975_09140) | 1878103..1878975 | - | 873 | WP_012775362.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| K6975_RS09145 (K6975_09145) | 1878995..1879525 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| K6975_RS09150 (K6975_09150) | 1879539..1879796 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| K6975_RS09155 (K6975_09155) | 1879798..1880058 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K6975_RS09160 (K6975_09160) | 1880134..1880589 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| K6975_RS09165 (K6975_09165) | 1880596..1880925 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6975_RS09170 (K6975_09170) | 1880915..1881202 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| K6975_RS09175 (K6975_09175) | 1881300..1881668 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| K6975_RS09180 (K6975_09180) | 1881661..1882230 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| K6975_RS09185 (K6975_09185) | 1882214..1882996 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| K6975_RS09190 (K6975_09190) | 1883103..1883240 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| K6975_RS09195 (K6975_09195) | 1883408..1884403 | - | 996 | WP_012775367.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| K6975_RS09200 (K6975_09200) | 1884423..1885235 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| K6975_RS09205 (K6975_09205) | 1885219..1885578 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| K6975_RS09210 (K6975_09210) | 1885649..1887043 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |