MGE detailed information
MGE type: Genomic_island MGE length: 23172 bp
Accession: NZ_CP077850 Location: 3505434..3528605 Organism: Erwinia amylovora strain CP200242 isolate missinsg Replicon: chromosome
Accession: NZ_CP077850 Location: 3505434..3528605 Organism: Erwinia amylovora strain CP200242 isolate missinsg Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KTR61_RS15820 (KTR61_15780) | 3501153..3504518 | + | 3366 | WP_004155194.1 | ATP-binding protein | - |
| KTR61_RS15825 (KTR61_15790) | 3504815..3505015 | - | 201 | Protein_3055 | transposase | - |
| KTR61_RS15830 (KTR61_15795) | 3505434..3505709 | - | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KTR61_RS15835 (KTR61_15800) | 3505713..3505961 | - | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KTR61_RS15840 (KTR61_15805) | 3506058..3506891 | - | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| KTR61_RS15845 (KTR61_15810) | 3507004..3507324 | - | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| KTR61_RS15850 (KTR61_15815) | 3507361..3507684 | - | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KTR61_RS15855 (KTR61_15820) | 3507697..3508167 | - | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| KTR61_RS15860 (KTR61_15825) | 3508238..3508812 | - | 575 | Protein_3062 | DUF932 domain-containing protein | - |
| KTR61_RS15865 (KTR61_15830) | 3509037..3509279 | - | 243 | WP_004155184.1 | hypothetical protein | - |
| KTR61_RS15870 (KTR61_15835) | 3510489..3510686 | + | 198 | WP_004155182.1 | AlpA family phage regulatory protein | - |
| KTR61_RS15875 | 3510794..3511144 | + | 351 | WP_004155181.1 | hypothetical protein | - |
| KTR61_RS15880 (KTR61_15845) | 3511588..3512673 | + | 1086 | WP_004155179.1 | DNA sulfur modification protein DndB | - |
| KTR61_RS15885 (KTR61_15850) | 3512670..3514304 | + | 1635 | WP_004155178.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| KTR61_RS15890 (KTR61_15855) | 3514294..3516294 | + | 2001 | WP_004155177.1 | DNA sulfur modification protein DndD | - |
| KTR61_RS15895 (KTR61_15860) | 3516294..3516647 | + | 354 | WP_009349902.1 | DNA sulfur modification protein DndE | - |
| KTR61_RS15900 (KTR61_15865) | 3516652..3518034 | + | 1383 | WP_169799831.1 | class I SAM-dependent methyltransferase | - |
| KTR61_RS15905 (KTR61_15870) | 3518239..3519060 | - | 822 | WP_004155174.1 | restriction endonuclease | - |
| KTR61_RS15910 (KTR61_15875) | 3519057..3524138 | - | 5082 | WP_004155173.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| KTR61_RS15915 (KTR61_15880) | 3524119..3525441 | - | 1323 | WP_004155172.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| KTR61_RS15920 (KTR61_15885) | 3525446..3527092 | - | 1647 | WP_004155171.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| KTR61_RS15925 (KTR61_15890) | 3527328..3528605 | - | 1278 | WP_004155169.1 | hypothetical protein ; Integrase | Integrase |
| KTR61_RS15935 (KTR61_15900) | 3529226..3529735 | + | 510 | WP_004155168.1 | DUF2501 domain-containing protein | - |
| KTR61_RS15940 (KTR61_15905) | 3529906..3531405 | + | 1500 | WP_004155166.1 | DUF853 domain-containing protein | - |
| KTR61_RS15945 (KTR61_15910) | 3531407..3532684 | + | 1278 | WP_004155165.1 | DUF445 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA10128, TA294492 | NZ_NQJO01000001 | 3404618..3427747 | 0 |