MGE detailed information

MGE type: Conjugative plasmid        MGE length: 146805 bp
Accession: NZ_CP076694        Location: 1..146805         Organism: Escherichia coli strain S103EC       Replicon: plasmid pS103EC_A


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KQ261_RS25325 (1) 1..1380 + 1380 WP_000119836.1 Fe-S-containing protein -
KQ261_RS25330 (1383) 1383..2666 + 1284 WP_000964653.1 ABC transporter permease -
KQ261_RS25335 (2656) 2656..3786 + 1131 WP_000729219.1 ABC transporter permease -
KQ261_RS25340 (3791) 3791..4486 + 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
KQ261_RS25345 (4473) 4473..4958 + 486 WP_001554949.1 TlpA disulfide reductase family protein -
KQ261_RS25350 (4983) 4983..5468 + 486 WP_000874189.1 hypothetical protein -
KQ261_RS25355 (5590) 5590..6120 + 531 Protein_6 histidine-type phosphatase -
KQ261_RS25360 (6178) 6178..6882 - 705 WP_001505086.1 IS6 family transposase IS26 Transposase
KQ261_RS25365 (6968) 6968..7998 + 1031 Protein_8 IS3 family transposase -
KQ261_RS25370 (8047) 8047..8403 - 357 WP_001403398.1 IS66 family transposase IS682 Transposase
KQ261_RS25375 (8775) 8775..10325 - 1551 WP_000127288.1 SLC13 family permease -
KQ261_RS25380 (10364) 10364..11362 - 999 WP_000803224.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA -
KQ261_RS25385 (11385) 11385..12686 - 1302 WP_001403397.1 four-carbon acid sugar kinase family protein -
KQ261_RS25390 (12719) 12719..13381 - 663 WP_233298555.1 DeoR/GlpR family DNA-binding transcription regulator -
KQ261_RS25395 (13494) 13494..14576 + 1083 WP_253941068.1 Arabinose 5-phosphate isomerase KdsD VF
KQ261_RS25400 (14652) 14652..14864 - 213 Protein_15 IS3 family transposase ISCfr6 Transposase
KQ261_RS25405 (14866) 14866..15483 + 618 Protein_16 3-methyl-2-oxobutanoate hydroxymethyltransferase -
KQ261_RS25410 (15495) 15495..16346 + 852 WP_086732347.1 pantoate--beta-alanine ligase -
KQ261_RS26575 (16491) 16491..16565 - 75 Protein_18 hypothetical protein -
KQ261_RS25415 (16644) 16644..16884 + 241 Protein_19 polysaccharide deacetylase family protein -
KQ261_RS25420 (16888) 16888..17268 - 381 WP_000621515.1 aspartate 1-decarboxylase -
KQ261_RS25425 (17542) 17542..17673 + 132 Protein_21 Recombination-promoting nuclease RpnD VF
KQ261_RS25430 (17871) 17871..19265 + 1395 WP_050488426.1 MFS transporter -
KQ261_RS25435 (19371) 19371..20402 + 1032 WP_000194408.1 LacI family DNA-binding transcriptional regulator -
KQ261_RS25440 (20377) 20377..21396 + 1020 WP_077758491.1 nucleoside hydrolase -
KQ261_RS25445 (21460) 21460..22173 + 714 WP_086732346.1 Protein SapB VF
KQ261_RS25450 (22355) 22355..22981 + 627 WP_252397316.1 EAL domain-containing protein -
KQ261_RS25455 (23347) 23347..23632 - 286 Protein_27 type II toxin-antitoxin system RelE/ParE family toxin -
KQ261_RS25460 (23622) 23622..23876 - 255 WP_000108831.1 type II toxin-antitoxin system RelB/DinJ family antitoxin -
KQ261_RS25465 (23932) 23932..24072 - 141 WP_165395303.1 hypothetical protein -
KQ261_RS25470 (24776) 24776..25633 - 858 WP_032265352.1 incFII family plasmid replication initiator RepA -
KQ261_RS25475 (25626) 25626..25700 - 75 WP_031943482.1 RepA leader peptide Tap -
KQ261_RS25480 (25700) 25700..25831 - 132 Protein_32 protein CopA/IncA -
KQ261_RS25485 (25937) 25937..26191 - 255 WP_000083850.1 replication regulatory protein RepA -
KQ261_RS25490 (26488) 26488..26622 - 135 WP_023144756.1 Hok/Gef family protein Toxin Detail
- (26668) 26668..26719 + 52 NuclAT_1 - Antitoxin Detail
- (26668) 26668..26719 + 52 NuclAT_1 - Antitoxin Detail
- (26668) 26668..26719 + 52 NuclAT_1 - Antitoxin Detail
- (26668) 26668..26719 + 52 NuclAT_1 - Antitoxin Detail
KQ261_RS25495 (26686) 26686..26972 - 287 Protein_35 DUF2726 domain-containing protein -
KQ261_RS25500 (27485) 27485..27697 - 213 WP_013023861.1 hypothetical protein -
KQ261_RS25505 (27828) 27828..28388 - 561 WP_000139341.1 fertility inhibition protein FinO -
KQ261_RS25510 (28443) 28443..29189 - 747 WP_000205718.1 conjugal transfer pilus acetylase TraX -
KQ261_RS25515 (29209) 29209..34479 - 5271 WP_096967568.1 Multifunctional conjugation protein TraI Relaxase
KQ261_RS25520 (34479) 34479..35198 - 720 Protein_40 type IV secretion system DNA-binding domain-containing protein -
KQ261_RS25525 (35230) 35230..36843 - 1614 WP_000080195.1 IS66 family transposase ISEc23 Transposase
KQ261_RS25530 (36874) 36874..37224 - 351 WP_000624722.1 IS66 family transposase ISEc23 Transposase
KQ261_RS25535 (37221) 37221..37646 - 426 WP_000422741.1 IS66 family transposase ISEc23 Transposase
KQ261_RS25540 (37733) 37733..39199 - 1467 Protein_44 type IV conjugative transfer system coupling protein TraD -
KQ261_RS25545 (39481) 39481..40092 - 612 WP_249593483.1 hypothetical protein -
KQ261_RS25550 (40164) 40164..40874 - 711 WP_225089020.1 conjugal transfer complement resistance protein TraT -
KQ261_RS25555 (40944) 40944..41429 - 486 WP_086732395.1 surface exclusion protein -
KQ261_RS25560 (41445) 41445..42368 - 924 Protein_48 conjugal transfer protein TraG -
KQ261_RS25565 (42440) 42440..43609 + 1170 Protein_49 IS3 family transposase ISEc52 Transposase
KQ261_RS25570 (43619) 43619..45520 - 1902 Protein_50 conjugal transfer mating pair stabilization protein TraG -
KQ261_RS25575 (45517) 45517..46890 - 1374 WP_001403427.1 conjugal transfer pilus assembly protein TraH -
KQ261_RS25580 (46877) 46877..47269 - 393 WP_000659962.1 F-type conjugal transfer protein TrbF -
KQ261_RS25585 (47250) 47250..47597 - 348 WP_071571857.1 P-type conjugative transfer protein TrbJ -
KQ261_RS25590 (47527) 47527..48072 - 546 WP_000059829.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
KQ261_RS25595 (48059) 48059..48343 - 285 WP_001617873.1 type-F conjugative transfer system pilin chaperone TraQ -
KQ261_RS25600 (48470) 48470..48808 - 339 WP_086732396.1 conjugal transfer protein TrbA -
KQ261_RS25605 (48824) 48824..49567 - 744 WP_001403429.1 type-F conjugative transfer system pilin assembly protein TraF -
KQ261_RS25610 (49560) 49560..49817 - 258 WP_000864347.1 conjugal transfer protein TrbE -
KQ261_RS25615 (49844) 49844..51694 - 1851 WP_000821866.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
KQ261_RS25620 (51691) 51691..52329 - 639 WP_001080259.1 type-F conjugative transfer system pilin assembly protein TrbC -
KQ261_RS25625 (52338) 52338..52643 - 306 WP_000224413.1 hypothetical protein -
KQ261_RS25630 (52673) 52673..53665 - 993 WP_000830190.1 conjugal transfer pilus assembly protein TraU -
KQ261_RS25635 (53662) 53662..54294 - 633 WP_001203727.1 type-F conjugative transfer system protein TraW -
KQ261_RS25640 (54291) 54291..54677 - 387 WP_000214084.1 type-F conjugative transfer system protein TrbI -
KQ261_RS25645 (54674) 54674..57301 - 2628 WP_001505126.1 type IV secretion system protein TraC -
KQ261_RS25650 (57461) 57461..57682 - 222 WP_001278694.1 conjugal transfer protein TraR -
KQ261_RS25655 (57817) 57817..58332 - 516 WP_001403433.1 type IV conjugative transfer system lipoprotein TraV -
KQ261_RS25660 (58332) 58332..58643 - 312 WP_001057272.1 conjugal transfer protein TrbD -
KQ261_RS25665 (58630) 58630..59196 - 567 WP_000896601.1 conjugal transfer pilus-stabilizing protein TraP -
KQ261_RS25670 (59186) 59186..60637 - 1452 WP_000146647.1 F-type conjugal transfer pilus assembly protein TraB -
KQ261_RS25675 (60637) 60637..61365 - 729 WP_077904147.1 type-F conjugative transfer system secretin TraK -
KQ261_RS25680 (61352) 61352..61918 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
KQ261_RS25685 (61940) 61940..62251 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
KQ261_RS25690 (62256) 62256..62618 - 363 WP_000338606.1 type IV conjugative transfer system pilin TraA -
KQ261_RS25695 (62652) 62652..62879 - 228 WP_001254388.1 conjugal transfer relaxosome protein TraY -
KQ261_RS25700 (62967) 62967..63644 - 678 WP_001348626.1 PAS domain-containing protein -
KQ261_RS25705 (63778) 63778..64161 - 384 WP_216684398.1 conjugal transfer relaxosome DNA-binding protein TraM -
KQ261_RS25710 (64492) 64492..65094 + 603 WP_000243712.1 hypothetical protein VF
KQ261_RS25715 (65391) 65391..66212 - 822 WP_001234469.1 DUF932 domain-containing protein -
KQ261_RS25720 (66332) 66332..66619 - 288 WP_000107535.1 hypothetical protein -
KQ261_RS26580 (66644) 66644..66850 - 207 WP_000547968.1 hypothetical protein -
KQ261_RS26585 (66920) 66920..67093 + 174 Protein_82 hypothetical protein -
KQ261_RS26590 (67091) 67091..67321 - 231 WP_001426396.1 hypothetical protein -
KQ261_RS25725 (67541) 67541..67666 - 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
KQ261_RS26595 (67608) 67608..67757 - 150 Protein_85 plasmid maintenance protein Mok -
- (67743) 67743..67967 - 225 NuclAT_0 - Antitoxin Detail
- (67743) 67743..67967 - 225 NuclAT_0 - Antitoxin Detail
- (67743) 67743..67967 - 225 NuclAT_0 - Antitoxin Detail
- (67743) 67743..67967 - 225 NuclAT_0 - Antitoxin Detail
KQ261_RS25730 (67779) 67779..67967 + 189 WP_001299721.1 hypothetical protein -
KQ261_RS25735 (67936) 67936..68698 - 763 Protein_87 plasmid SOS inhibition protein A -
KQ261_RS25740 (68695) 68695..69129 - 435 WP_000845940.1 conjugation system SOS inhibitor PsiB -
KQ261_RS25745 (69184) 69184..71142 - 1959 WP_086732397.1 ParB/RepB/Spo0J family partition protein -
KQ261_RS25750 (71208) 71208..71441 - 234 WP_000005990.1 DUF905 family protein -
KQ261_RS25755 (71504) 71504..72043 - 540 WP_000290841.1 single-stranded DNA-binding protein -
KQ261_RS25760 (72069) 72069..72275 - 207 WP_000275853.1 hypothetical protein -
KQ261_RS25765 (72188) 72188..72523 - 336 WP_014106969.1 hypothetical protein -
KQ261_RS26600 (72516) 72516..72761 - 246 WP_071533131.1 hypothetical protein -
KQ261_RS25770 (72686) 72686..72886 - 201 WP_025492130.1 hypothetical protein -
KQ261_RS25775 (72912) 72912..73475 - 564 WP_001315564.1 class I SAM-dependent methyltransferase -
KQ261_RS25780 (73523) 73523..74884 - 1362 WP_038999961.1 DUF3560 domain-containing protein -
KQ261_RS25785 (74936) 74936..75166 - 231 WP_000218642.1 hypothetical protein -
KQ261_RS25790 (76202) 76202..76393 - 192 WP_001027493.1 hypothetical protein -
KQ261_RS25795 (76390) 76390..76812 - 423 WP_000271762.1 DUF1380 family protein -
KQ261_RS25800 (76859) 76859..77284 - 426 WP_001198928.1 antirestriction protein -
KQ261_RS25805 (77701) 77701..78477 - 777 WP_001753849.1 hypothetical protein -
KQ261_RS25810 (78528) 78528..79046 - 519 WP_250193910.1 DUF1380 family protein -
KQ261_RS25815 (78976) 78976..79197 - 222 WP_001104873.1 hypothetical protein -
KQ261_RS25820 (79198) 79198..79881 - 684 WP_000086185.1 DNA methylase -
KQ261_RS25825 (79958) 79958..80269 - 312 WP_011254640.1 hypothetical protein -
KQ261_RS25830 (80266) 80266..81168 - 903 WP_001348615.1 DUF1281 domain-containing protein -
KQ261_RS25835 (81586) 81586..81834 + 249 WP_000618110.1 DinI-like family protein -
KQ261_RS25840 (81831) 81831..82268 + 438 WP_000109071.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
KQ261_RS25845 (82268) 82268..83539 + 1272 WP_021563940.1 Y-family DNA polymerase -
KQ261_RS25850 (83544) 83544..83936 - 393 WP_000340829.1 plasmid partitioning/stability family protein -
KQ261_RS25855 (83941) 83941..84912 - 972 WP_001103691.1 plasmid segregation protein ParM -
KQ261_RS25860 (85141) 85141..85785 + 645 WP_000633913.1 division plane positioning ATPase MipZ -
KQ261_RS25865 (85779) 85779..86054 + 276 WP_000239529.1 hypothetical protein -
KQ261_RS25870 (86192) 86192..86983 - 792 WP_032151908.1 site-specific integrase -
KQ261_RS25875 (86980) 86980..87486 - 507 WP_235838366.1 hypothetical protein -
KQ261_RS25880 (87477) 87477..88181 + 705 WP_001505086.1 IS6 family transposase IS26 Transposase
KQ261_RS25885 (88330) 88330..89655 - 1326 WP_021512928.1 reactive chlorine resistance oxidoreductase RclA -
KQ261_RS25890 (89765) 89765..90462 + 698 WP_114161604.1 IS1 family transposase IS1R Transposase
KQ261_RS25895 (90563) 90563..90844 - 282 WP_000639434.1 hypothetical protein -
KQ261_RS25900 (90946) 90946..91839 - 894 Protein_121 IS3 family transposase ISEhe3 Transposase
KQ261_RS25905 (91907) 91907..93058 + 1152 WP_058682604.1 IS30 family transposase IS30D Transposase
KQ261_RS25910 (93071) 93071..93328 - 258 Protein_123 IS3 family transposase ISEc52 Transposase
KQ261_RS25915 (93405) 93405..93817 - 413 Protein_124 IS1 family transposase IS1A Transposase
KQ261_RS25920 (94031) 94031..97147 - 3117 WP_001553854.1 HsdR family type I site-specific deoxyribonuclease -
KQ261_RS25925 (97269) 97269..98552 - 1284 WP_001617890.1 restriction endonuclease subunit S -
KQ261_RS25930 (98549) 98549..100105 - 1557 WP_001617892.1 type I restriction-modification system subunit M -
KQ261_RS25935 (100288) 100288..100509 + 222 WP_001190712.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
KQ261_RS25940 (100509) 100509..100889 + 381 WP_001216034.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
KQ261_RS25945 (100894) 100894..101073 + 180 WP_001513661.1 hypothetical protein -
KQ261_RS25950 (101101) 101101..101379 + 279 Protein_131 pdcB -
KQ261_RS25955 (101384) 101384..101797 + 414 Protein_132 IS3 family transposase ISLad1 Transposase
KQ261_RS25960 (101747) 101747..102082 - 336 WP_169329198.1 type I deoxyribonuclease HsdR -
KQ261_RS25965 (102292) 102292..103272 - 981 WP_000019407.1 IS5 family transposase IS5D Transposase
KQ261_RS25970 (103516) 103516..104919 + 1404 WP_001373486.1 S-methylmethionine permease -
KQ261_RS25975 (104906) 104906..105838 + 933 WP_000081352.1 homocysteine S-methyltransferase -
KQ261_RS25980 (105947) 105947..106993 - 1047 WP_000192349.1 sn-glycerol-3-phosphate import ATP-binding protein UgpC VF
KQ261_RS25985 (107005) 107005..107352 - 348 Protein_138 ABC transporter permease subunit -
KQ261_RS25995 (108188) 108188..109318 - 1131 WP_086732353.1 DUF4238 domain-containing protein -
KQ261_RS26000 (109348) 109348..110451 - 1104 WP_001127573.1 nucleotide-binding protein -
KQ261_RS26005 (110780) 110780..111037 + 258 WP_000371887.1 hypothetical protein -
KQ261_RS26010 (111037) 111037..111627 + 591 WP_086732352.1 hypothetical protein -
KQ261_RS26015 (111892) 111892..113448 + 1557 WP_042068411.1 AAA family ATPase -
KQ261_RS26020 (114058) 114058..114348 - 291 WP_000648897.1 hypothetical protein -
KQ261_RS26025 (114348) 114348..115472 - 1125 WP_032174239.1 DUF4238 domain-containing protein -
KQ261_RS26030 (115507) 115507..117030 - 1524 WP_000921251.1 hypothetical protein -
KQ261_RS26035 (117321) 117321..118079 - 759 WP_032174241.1 hypothetical protein -
KQ261_RS26040 (118091) 118091..118582 - 492 WP_000528930.1 HEPN family nuclease -
KQ261_RS26045 (118973) 118973..121594 + 2622 WP_000283688.1 histidinol-phosphatase -
KQ261_RS26050 (121793) 121793..122023 + 231 WP_001261274.1 type II toxin-antitoxin system VapB family antitoxin -
KQ261_RS26055 (122020) 122020..122336 + 317 Protein_152 type II toxin-antitoxin system VapC family toxin -
KQ261_RS26060 (122392) 122392..122609 - 218 Protein_153 transposase -
KQ261_RS26065 (122610) 122610..123140 - 531 WP_000348883.1 GNAT family N-acetyltransferase Toxin Detail
KQ261_RS26070 (123144) 123144..123413 - 270 WP_001275013.1 DUF1778 domain-containing protein -
KQ261_RS26075 (124301) 124301..125290 + 990 WP_024201093.1 RepB family plasmid replication initiator protein -
KQ261_RS26080 (125572) 125572..126354 - 783 WP_216684396.1 tyrosine-type recombinase/integrase -
KQ261_RS26085 (126475) 126475..126657 - 183 WP_042065278.1 hypothetical protein -
KQ261_RS26605 (126724) 126724..127014 - 291 Protein_159 type II toxin-antitoxin system RelE/ParE family toxin -
KQ261_RS26095 (127001) 127001..127269 - 269 Protein_160 type II toxin-antitoxin system ParD family antitoxin -
KQ261_RS26100 (127801) 127801..128970 + 1170 WP_086732351.1 hypothetical protein -
KQ261_RS26105 (129003) 129003..129131 + 129 Protein_162 IS481 family transposase -
KQ261_RS26110 (129256) 129256..129459 - 204 Protein_163 hypothetical protein -
KQ261_RS26115 (129565) 129565..129840 - 276 WP_000421272.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
KQ261_RS26120 (129840) 129840..130124 - 285 WP_001387467.1 ribbon-helix-helix domain-containing protein -
KQ261_RS26125 (130729) 130729..131481 + 753 WP_001403368.1 IclR family transcriptional regulator -
KQ261_RS26130 (131527) 131527..132492 - 966 WP_001022265.1 2-keto-3-deoxygluconate transporter -
KQ261_RS26135 (132525) 132525..132905 - 381 WP_000710783.1 Rid family detoxifying hydrolase -
KQ261_RS26140 (132930) 132930..133820 - 891 WP_001077068.1 dihydrodipicolinate synthase family protein -
KQ261_RS26145 (134053) 134053..134247 - 195 WP_000796505.1 hypothetical protein -
KQ261_RS26150 (134221) 134221..134661 + 441 Protein_171 zinc-binding dehydrogenase -
KQ261_RS26155 (134792) 134792..135670 + 879 WP_000338039.1 sugar ABC transporter permease -
KQ261_RS26160 (135660) 135660..136547 + 888 WP_001271561.1 carbohydrate ABC transporter permease -
KQ261_RS26165 (136558) 136558..137382 + 825 WP_000922702.1 phosphodiesterase -
KQ261_RS26170 (137388) 137388..138461 + 1074 WP_130647889.1 sn-glycerol-3-phosphate import ATP-binding protein UgpC VF
KQ261_RS26175 (138454) 138454..139764 + 1311 WP_000476108.1 ABC transporter substrate-binding protein -
KQ261_RS26180 (139823) 139823..140131 - 309 Protein_177 IS4 family transposase ISEc13 Transposase
KQ261_RS26185 (140358) 140358..141881 + 1524 WP_130647888.1 IS21 family transposase ISSso4 Transposase
KQ261_RS26190 (141898) 141898..142077 + 180 Protein_179 IS21 family transposase ISSso4 Transposase
KQ261_RS26195 (142140) 142140..142844 + 705 WP_086732349.1 IS6 family transposase IS26 Transposase
KQ261_RS26200 (143139) 143139..143900 + 762 WP_001225378.1 Na(+)-translocating NADH-quinone reductase subunit C -
KQ261_RS26205 (144248) 144248..146134 + 1887 WP_001332815.1 FTR1 family protein -
KQ261_RS26210 (146175) 146175..146702 + 528 WP_000178050.1 iron transporter -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance