MGE detailed information
MGE type: Genomic_island MGE length: 23939 bp
Accession: NZ_CP076596 Location: 2292161..2316099 Organism: Erwinia amylovora isolate CP20161301 Replicon: chromosome
Accession: NZ_CP076596 Location: 2292161..2316099 Organism: Erwinia amylovora isolate CP20161301 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQH32_RS10240 (KQH32_10265) | 2288082..2289359 | - | 1278 | WP_004155165.1 | DUF445 family protein | - |
| KQH32_RS10245 (KQH32_10270) | 2289361..2290860 | - | 1500 | WP_004155166.1 | DUF853 domain-containing protein | - |
| KQH32_RS10250 (KQH32_10275) | 2291031..2291540 | - | 510 | WP_004155168.1 | DUF2501 domain-containing protein | - |
| KQH32_RS10260 (KQH32_10285) | 2292161..2293438 | + | 1278 | WP_004155169.1 | Prophage integrase IntA ; Integrase | Integrase |
| KQH32_RS10265 (KQH32_10290) | 2293674..2295320 | + | 1647 | WP_004155171.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| KQH32_RS10270 (KQH32_10295) | 2295325..2296647 | + | 1323 | WP_004155172.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| KQH32_RS10275 (KQH32_10300) | 2296628..2301709 | + | 5082 | WP_004155173.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| KQH32_RS10280 (KQH32_10305) | 2301706..2302527 | + | 822 | WP_004155174.1 | restriction endonuclease | - |
| KQH32_RS10285 (KQH32_10310) | 2302732..2304114 | - | 1383 | WP_169799831.1 | class I SAM-dependent methyltransferase | - |
| KQH32_RS10290 (KQH32_10315) | 2304119..2304472 | - | 354 | WP_009349902.1 | DNA sulfur modification protein DndE | - |
| KQH32_RS10295 (KQH32_10320) | 2304472..2306472 | - | 2001 | WP_004155177.1 | DNA sulfur modification protein DndD | - |
| KQH32_RS10300 (KQH32_10325) | 2306462..2308096 | - | 1635 | WP_004155178.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| KQH32_RS10305 (KQH32_10330) | 2308093..2309178 | - | 1086 | WP_004155179.1 | DNA sulfur modification protein DndB | - |
| KQH32_RS10310 | 2309622..2309972 | - | 351 | WP_004155181.1 | hypothetical protein | - |
| KQH32_RS10315 (KQH32_10340) | 2310080..2310277 | - | 198 | WP_004155182.1 | AlpA family phage regulatory protein | - |
| KQH32_RS10320 (KQH32_10345) | 2311487..2311729 | + | 243 | WP_004155184.1 | hypothetical protein | - |
| KQH32_RS10325 (KQH32_10350) | 2311954..2312528 | + | 575 | Protein_1991 | DUF932 domain-containing protein | - |
| KQH32_RS10330 (KQH32_10355) | 2312599..2313069 | + | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| KQH32_RS10335 (KQH32_10360) | 2313082..2313405 | + | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KQH32_RS10340 (KQH32_10365) | 2313442..2313762 | + | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| KQH32_RS10345 (KQH32_10370) | 2313875..2314708 | + | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| KQH32_RS10350 (KQH32_10375) | 2314805..2315053 | + | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KQH32_RS10355 (KQH32_10380) | 2315057..2315332 | + | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KQH32_RS10360 (KQH32_10385) | 2315751..2315951 | + | 201 | Protein_1998 | IS3 family transposase IS1400 | Transposase |
| KQH32_RS10365 (KQH32_10395) | 2316248..2319613 | - | 3366 | WP_004155194.1 | ATP-binding protein | - |
| KQH32_RS10370 (KQH32_10400) | 2320000..2320557 | + | 558 | WP_004155195.1 | YecA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0.001 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA10128, TA294492 | NZ_NQJO01000001 | 3404618..3427747 | 0.001 |