MGE detailed information
MGE type: Genomic_island MGE length: 23172 bp
Accession: NZ_CP076595 Location: 1620302..1643473 Organism: Erwinia amylovora isolate CP20130202 Replicon: chromosome
Accession: NZ_CP076595 Location: 1620302..1643473 Organism: Erwinia amylovora isolate CP20130202 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQH34_RS07540 (KQH34_07520) | 1616021..1619386 | + | 3366 | WP_004155194.1 | ATP-binding protein | - |
| KQH34_RS07545 (KQH34_07530) | 1619683..1619883 | - | 201 | Protein_1464 | transposase | - |
| KQH34_RS07550 (KQH34_07535) | 1620302..1620577 | - | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KQH34_RS07555 (KQH34_07540) | 1620581..1620829 | - | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KQH34_RS07560 (KQH34_07545) | 1620926..1621759 | - | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| KQH34_RS07565 (KQH34_07550) | 1621872..1622192 | - | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| KQH34_RS07570 (KQH34_07555) | 1622229..1622552 | - | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KQH34_RS07575 (KQH34_07560) | 1622565..1623035 | - | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| KQH34_RS07580 (KQH34_07565) | 1623106..1623680 | - | 575 | Protein_1471 | DUF932 domain-containing protein | - |
| KQH34_RS07585 (KQH34_07570) | 1623905..1624147 | - | 243 | WP_004155184.1 | hypothetical protein | - |
| KQH34_RS07590 (KQH34_07575) | 1625357..1625554 | + | 198 | WP_004155182.1 | AlpA family phage regulatory protein | - |
| KQH34_RS07595 | 1625662..1626012 | + | 351 | WP_004155181.1 | hypothetical protein | - |
| KQH34_RS07600 (KQH34_07585) | 1626456..1627541 | + | 1086 | WP_004155179.1 | DNA sulfur modification protein DndB | - |
| KQH34_RS07605 (KQH34_07590) | 1627538..1629172 | + | 1635 | WP_004155178.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| KQH34_RS07610 (KQH34_07595) | 1629162..1631162 | + | 2001 | WP_004155177.1 | DNA sulfur modification protein DndD | - |
| KQH34_RS07615 (KQH34_07600) | 1631162..1631515 | + | 354 | WP_009349902.1 | DNA sulfur modification protein DndE | - |
| KQH34_RS07620 (KQH34_07605) | 1631520..1632902 | + | 1383 | WP_169799831.1 | class I SAM-dependent methyltransferase | - |
| KQH34_RS07625 (KQH34_07610) | 1633107..1633928 | - | 822 | WP_004155174.1 | restriction endonuclease | - |
| KQH34_RS07630 (KQH34_07615) | 1633925..1639006 | - | 5082 | WP_004155173.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| KQH34_RS07635 (KQH34_07620) | 1638987..1640309 | - | 1323 | WP_004155172.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| KQH34_RS07640 (KQH34_07625) | 1640314..1641960 | - | 1647 | WP_004155171.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| KQH34_RS07645 (KQH34_07630) | 1642196..1643473 | - | 1278 | WP_004155169.1 | Prophage integrase IntA ; Integrase | Integrase |
| KQH34_RS07655 (KQH34_07640) | 1644094..1644603 | + | 510 | WP_004155168.1 | DUF2501 domain-containing protein | - |
| KQH34_RS07660 (KQH34_07645) | 1644774..1646273 | + | 1500 | WP_004155166.1 | DUF853 domain-containing protein | - |
| KQH34_RS07665 (KQH34_07650) | 1646275..1647552 | + | 1278 | WP_004155165.1 | DUF445 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA10128, TA294492 | NZ_NQJO01000001 | 3404618..3427747 | 0 |