MGE detailed information
MGE type: Genomic_island MGE length: 23563 bp
Accession: NZ_CP076594 Location: 3117326..3140888 Organism: Erwinia amylovora isolate CP20086202 Replicon: chromosome
Accession: NZ_CP076594 Location: 3117326..3140888 Organism: Erwinia amylovora isolate CP20086202 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQH36_RS14160 (KQH36_14150) | 3112492..3113049 | - | 558 | WP_004155195.1 | YecA family protein | - |
| KQH36_RS14165 (KQH36_14155) | 3113436..3116801 | + | 3366 | WP_004155194.1 | ATP-binding protein | - |
| KQH36_RS14170 (KQH36_14165) | 3117098..3117298 | - | 201 | Protein_2739 | transposase | - |
| KQH36_RS14175 (KQH36_14170) | 3117717..3117992 | - | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KQH36_RS14180 (KQH36_14175) | 3117996..3118244 | - | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KQH36_RS14185 (KQH36_14180) | 3118341..3119174 | - | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| KQH36_RS14190 (KQH36_14185) | 3119287..3119607 | - | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| KQH36_RS14195 (KQH36_14190) | 3119644..3119967 | - | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KQH36_RS14200 (KQH36_14195) | 3119980..3120450 | - | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| KQH36_RS14205 (KQH36_14200) | 3120521..3121095 | - | 575 | Protein_2746 | DUF932 domain-containing protein | - |
| KQH36_RS14210 (KQH36_14205) | 3121320..3121562 | - | 243 | WP_004155184.1 | hypothetical protein | - |
| KQH36_RS14215 (KQH36_14210) | 3122772..3122969 | + | 198 | WP_004155182.1 | AlpA family phage regulatory protein | - |
| KQH36_RS14220 | 3123077..3123427 | + | 351 | WP_004155181.1 | hypothetical protein | - |
| KQH36_RS14225 (KQH36_14220) | 3123871..3124956 | + | 1086 | WP_004155179.1 | DNA sulfur modification protein DndB | - |
| KQH36_RS14230 (KQH36_14225) | 3124953..3126587 | + | 1635 | WP_004155178.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| KQH36_RS14235 (KQH36_14230) | 3126577..3128577 | + | 2001 | WP_004155177.1 | DNA sulfur modification protein DndD | - |
| KQH36_RS14240 (KQH36_14235) | 3128577..3128930 | + | 354 | WP_009349902.1 | DNA sulfur modification protein DndE | - |
| KQH36_RS14245 (KQH36_14240) | 3128935..3130317 | + | 1383 | WP_169799831.1 | class I SAM-dependent methyltransferase | - |
| KQH36_RS14250 (KQH36_14245) | 3130522..3131343 | - | 822 | WP_004155174.1 | restriction endonuclease | - |
| KQH36_RS14255 (KQH36_14250) | 3131340..3136421 | - | 5082 | WP_004155173.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| KQH36_RS14260 (KQH36_14255) | 3136402..3137724 | - | 1323 | WP_004155172.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| KQH36_RS14265 (KQH36_14260) | 3137729..3139375 | - | 1647 | WP_004155171.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| KQH36_RS14270 (KQH36_14265) | 3139611..3140888 | - | 1278 | WP_004155169.1 | Prophage integrase IntA ; Integrase | Integrase |
| KQH36_RS14280 (KQH36_14275) | 3141509..3142018 | + | 510 | WP_004155168.1 | DUF2501 domain-containing protein | - |
| KQH36_RS14285 (KQH36_14280) | 3142189..3143688 | + | 1500 | WP_004155166.1 | DUF853 domain-containing protein | - |
| KQH36_RS14290 (KQH36_14285) | 3143690..3144967 | + | 1278 | WP_004155165.1 | DUF445 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0.001 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA10128, TA294492 | NZ_NQJO01000001 | 3404618..3427747 | 0.001 |