MGE detailed information
MGE type: Genomic_island MGE length: 23939 bp
Accession: NZ_CP076592 Location: 2304797..2328735 Organism: Erwinia amylovora isolate CP20140001 Replicon: chromosome
Accession: NZ_CP076592 Location: 2304797..2328735 Organism: Erwinia amylovora isolate CP20140001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQH33_RS10290 (KQH33_10315) | 2300718..2301995 | - | 1278 | WP_004155165.1 | DUF445 family protein | - |
| KQH33_RS10295 (KQH33_10320) | 2301997..2303496 | - | 1500 | WP_004155166.1 | DUF853 domain-containing protein | - |
| KQH33_RS10300 (KQH33_10325) | 2303667..2304176 | - | 510 | WP_004155168.1 | DUF2501 domain-containing protein | - |
| KQH33_RS10310 (KQH33_10335) | 2304797..2306074 | + | 1278 | WP_004155169.1 | hypothetical protein ; Integrase | Integrase |
| KQH33_RS10315 (KQH33_10340) | 2306310..2307956 | + | 1647 | WP_004155171.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| KQH33_RS10320 (KQH33_10345) | 2307961..2309283 | + | 1323 | WP_004155172.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| KQH33_RS10325 (KQH33_10350) | 2309264..2314345 | + | 5082 | WP_004155173.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| KQH33_RS10330 (KQH33_10355) | 2314342..2315163 | + | 822 | WP_004155174.1 | restriction endonuclease | - |
| KQH33_RS10335 (KQH33_10360) | 2315368..2316750 | - | 1383 | WP_169799831.1 | class I SAM-dependent methyltransferase | - |
| KQH33_RS10340 (KQH33_10365) | 2316755..2317108 | - | 354 | WP_009349902.1 | DNA sulfur modification protein DndE | - |
| KQH33_RS10345 (KQH33_10370) | 2317108..2319108 | - | 2001 | WP_004155177.1 | DNA sulfur modification protein DndD | - |
| KQH33_RS10350 (KQH33_10375) | 2319098..2320732 | - | 1635 | WP_004155178.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| KQH33_RS10355 (KQH33_10380) | 2320729..2321814 | - | 1086 | WP_004155179.1 | DNA sulfur modification protein DndB | - |
| KQH33_RS10360 | 2322258..2322608 | - | 351 | WP_004155181.1 | hypothetical protein | - |
| KQH33_RS10365 (KQH33_10390) | 2322716..2322913 | - | 198 | WP_004155182.1 | AlpA family phage regulatory protein | - |
| KQH33_RS10370 (KQH33_10395) | 2324123..2324365 | + | 243 | WP_004155184.1 | hypothetical protein | - |
| KQH33_RS10375 (KQH33_10400) | 2324590..2325164 | + | 575 | Protein_2002 | DUF932 domain-containing protein | - |
| KQH33_RS10380 (KQH33_10405) | 2325235..2325705 | + | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| KQH33_RS10385 (KQH33_10410) | 2325718..2326041 | + | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KQH33_RS10390 (KQH33_10415) | 2326078..2326398 | + | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| KQH33_RS10395 (KQH33_10420) | 2326511..2327344 | + | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| KQH33_RS10400 (KQH33_10425) | 2327441..2327689 | + | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KQH33_RS10405 (KQH33_10430) | 2327693..2327968 | + | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KQH33_RS10410 (KQH33_10435) | 2328387..2328587 | + | 201 | Protein_2009 | IS3 family transposase IS1400 | Transposase |
| KQH33_RS10415 (KQH33_10445) | 2328884..2332249 | - | 3366 | WP_004155194.1 | ATP-binding protein | - |
| KQH33_RS10420 (KQH33_10450) | 2332636..2333193 | + | 558 | WP_004155195.1 | YecA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0.001 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA10128, TA294492 | NZ_NQJO01000001 | 3404618..3427747 | 0.001 |