MGE detailed information
MGE type: Genomic_island MGE length: 23939 bp
Accession: NZ_CP076590 Location: 223534..247472 Organism: Erwinia amylovora isolate CP200930 Replicon: chromosome
Accession: NZ_CP076590 Location: 223534..247472 Organism: Erwinia amylovora isolate CP200930 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQH39_RS01125 (KQH39_01135) | 219455..220732 | - | 1278 | WP_004155165.1 | DUF445 family protein | - |
| KQH39_RS01130 (KQH39_01140) | 220734..222233 | - | 1500 | WP_004155166.1 | DUF853 domain-containing protein | - |
| KQH39_RS01135 (KQH39_01145) | 222404..222913 | - | 510 | WP_004155168.1 | DUF2501 domain-containing protein | - |
| KQH39_RS01145 (KQH39_01155) | 223534..224811 | + | 1278 | WP_004155169.1 | integrase arm-type DNA-binding domain-containing protein | - |
| KQH39_RS01150 (KQH39_01160) | 225047..226693 | + | 1647 | WP_004155171.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| KQH39_RS01155 (KQH39_01165) | 226698..228020 | + | 1323 | WP_004155172.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| KQH39_RS01160 (KQH39_01170) | 228001..233082 | + | 5082 | WP_004155173.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| KQH39_RS01165 (KQH39_01175) | 233079..233900 | + | 822 | WP_004155174.1 | restriction endonuclease | - |
| KQH39_RS01170 (KQH39_01180) | 234105..235487 | - | 1383 | WP_169799831.1 | class I SAM-dependent methyltransferase | - |
| KQH39_RS01175 (KQH39_01185) | 235492..235845 | - | 354 | WP_009349902.1 | DNA sulfur modification protein DndE | - |
| KQH39_RS01180 (KQH39_01190) | 235845..237845 | - | 2001 | WP_004155177.1 | DNA sulfur modification protein DndD | - |
| KQH39_RS01185 (KQH39_01195) | 237835..239469 | - | 1635 | WP_004155178.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| KQH39_RS01190 (KQH39_01200) | 239466..240551 | - | 1086 | WP_004155179.1 | DNA sulfur modification protein DndB | - |
| KQH39_RS01195 | 240995..241345 | - | 351 | WP_004155181.1 | hypothetical protein | - |
| KQH39_RS01200 (KQH39_01210) | 241453..241650 | - | 198 | WP_004155182.1 | AlpA family phage regulatory protein | - |
| KQH39_RS01205 (KQH39_01215) | 242860..243102 | + | 243 | WP_004155184.1 | hypothetical protein | - |
| KQH39_RS01210 (KQH39_01220) | 243327..243901 | + | 575 | Protein_232 | DUF932 domain-containing protein | - |
| KQH39_RS01215 (KQH39_01225) | 243972..244442 | + | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| KQH39_RS01220 (KQH39_01230) | 244455..244778 | + | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KQH39_RS01225 (KQH39_01235) | 244815..245135 | + | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| KQH39_RS01230 (KQH39_01240) | 245248..246081 | + | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| KQH39_RS01235 (KQH39_01245) | 246178..246426 | + | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KQH39_RS01240 (KQH39_01250) | 246430..246705 | + | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KQH39_RS01245 (KQH39_01255) | 247124..247324 | + | 201 | Protein_239 | transposase | - |
| KQH39_RS01250 (KQH39_01265) | 247621..250986 | - | 3366 | WP_004155194.1 | ATP-binding protein | - |
| KQH39_RS01255 (KQH39_01270) | 251373..251930 | + | 558 | WP_004155195.1 | YecA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0.001 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA10128, TA294492 | NZ_NQJO01000001 | 3404618..3427747 | 0.001 |