MGE detailed information
MGE type: Genomic_island MGE length: 23939 bp
Accession: NZ_CP076589 Location: 571608..595546 Organism: Erwinia amylovora isolate CP201324 Replicon: chromosome
Accession: NZ_CP076589 Location: 571608..595546 Organism: Erwinia amylovora isolate CP201324 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQH38_RS02535 (KQH38_02540) | 567529..568806 | - | 1278 | WP_004155165.1 | DUF445 family protein | - |
| KQH38_RS02540 (KQH38_02545) | 568808..570307 | - | 1500 | WP_004155166.1 | DUF853 domain-containing protein | - |
| KQH38_RS02545 (KQH38_02550) | 570478..570987 | - | 510 | WP_004155168.1 | DUF2501 domain-containing protein | - |
| KQH38_RS02555 (KQH38_02560) | 571608..572885 | + | 1278 | WP_004155169.1 | Prophage integrase IntA ; Integrase | Integrase |
| KQH38_RS02560 (KQH38_02565) | 573121..574767 | + | 1647 | WP_004155171.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| KQH38_RS02565 (KQH38_02570) | 574772..576094 | + | 1323 | WP_004155172.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| KQH38_RS02570 (KQH38_02575) | 576075..581156 | + | 5082 | WP_004155173.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| KQH38_RS02575 (KQH38_02580) | 581153..581974 | + | 822 | WP_004155174.1 | restriction endonuclease | - |
| KQH38_RS02580 (KQH38_02585) | 582179..583561 | - | 1383 | WP_169799831.1 | class I SAM-dependent methyltransferase | - |
| KQH38_RS02585 (KQH38_02590) | 583566..583919 | - | 354 | WP_009349902.1 | DNA sulfur modification protein DndE | - |
| KQH38_RS02590 (KQH38_02595) | 583919..585919 | - | 2001 | WP_004155177.1 | DNA sulfur modification protein DndD | - |
| KQH38_RS02595 (KQH38_02600) | 585909..587543 | - | 1635 | WP_004155178.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| KQH38_RS02600 (KQH38_02605) | 587540..588625 | - | 1086 | WP_004155179.1 | DNA sulfur modification protein DndB | - |
| KQH38_RS02605 | 589069..589419 | - | 351 | WP_004155181.1 | hypothetical protein | - |
| KQH38_RS02610 (KQH38_02615) | 589527..589724 | - | 198 | WP_004155182.1 | AlpA family phage regulatory protein | - |
| KQH38_RS02615 (KQH38_02620) | 590934..591176 | + | 243 | WP_004155184.1 | hypothetical protein | - |
| KQH38_RS02620 (KQH38_02625) | 591401..591975 | + | 575 | Protein_509 | DUF932 domain-containing protein | - |
| KQH38_RS02625 (KQH38_02630) | 592046..592516 | + | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| KQH38_RS02630 (KQH38_02635) | 592529..592852 | + | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KQH38_RS02635 (KQH38_02640) | 592889..593209 | + | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| KQH38_RS02640 (KQH38_02645) | 593322..594155 | + | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| KQH38_RS02645 (KQH38_02650) | 594252..594500 | + | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KQH38_RS02650 (KQH38_02655) | 594504..594779 | + | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KQH38_RS02655 (KQH38_02660) | 595198..595398 | + | 201 | Protein_516 | IS3 family transposase IS1400 | Transposase |
| KQH38_RS02660 (KQH38_02670) | 595695..599060 | - | 3366 | WP_004155194.1 | ATP-binding protein | - |
| KQH38_RS02665 (KQH38_02675) | 599447..600004 | + | 558 | WP_004155195.1 | YecA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0.001 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA10128, TA294492 | NZ_NQJO01000001 | 3404618..3427747 | 0.001 |