MGE detailed information
MGE type: Prophage MGE length: 37140 bp
Accession: NZ_CP075722 Location: 2222554..2259693 Organism: Escherichia coli strain CPE35 Replicon: chromosome
Accession: NZ_CP075722 Location: 2222554..2259693 Organism: Escherichia coli strain CPE35 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KKZ10_RS10720 (2218453) | 2218453..2219673 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| KKZ10_RS10725 (2219798) | 2219798..2220493 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| KKZ10_RS10730 (2220446) | 2220446..2221738 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| KKZ10_RS10735 (2221897) | 2221897..2222511 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| KKZ10_RS10740 (2222554) | 2222554..2223408 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| KKZ10_RS10745 (2223410) | 2223410..2224027 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| KKZ10_RS10750 (2224038) | 2224038..2226278 | - | 2241 | Protein_2098 | molybdopterin-dependent oxidoreductase | - |
| KKZ10_RS10755 (2226280) | 2226280..2227776 | - | 1497 | Protein_2099 | molybdopterin-dependent oxidoreductase | - |
| KKZ10_RS10760 (2227975) | 2227975..2228280 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| KKZ10_RS10765 (2228388) | 2228388..2229098 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| KKZ10_RS10770 (2229101) | 2229101..2229661 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| KKZ10_RS10775 (2229696) | 2229696..2230037 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| KKZ10_RS10780 (2230172) | 2230172..2230498 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| KKZ10_RS10785 (2230704) | 2230704..2231918 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| KKZ10_RS10790 (2231930) | 2231930..2232949 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| KKZ10_RS10795 (2233137) | 2233137..2234417 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| KKZ10_RS10800 (2234452) | 2234452..2234703 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| KKZ10_RS10805 (2234776) | 2234776..2237247 | - | 2472 | Protein_2109 | 3'-5' exoribonuclease | - |
| KKZ10_RS10810 (2237340) | 2237340..2237531 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| KKZ10_RS10815 (2237528) | 2237528..2237716 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KKZ10_RS10820 (2238284) | 2238284..2238502 | - | 219 | WP_001171942.1 | protein YdfC | - |
| KKZ10_RS10825 (2238532) | 2238532..2238660 | - | 129 | WP_000344964.1 | protein YdfB | - |
| KKZ10_RS10830 (2238662) | 2238662..2238817 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| KKZ10_RS10835 (2238954) | 2238954..2239375 | + | 422 | Protein_2115 | hypothetical protein | - |
| KKZ10_RS10840 (2240031) | 2240031..2241053 | + | 1023 | Protein_2116 | ISNCY family transposase ISCARN112 | Transposase |
| KKZ10_RS10845 (2241174) | 2241174..2241323 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KKZ10_RS10850 (2241760) | 2241760..2242092 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KKZ10_RS10855 (2242295) | 2242295..2242600 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KKZ10_RS10860 (2242625) | 2242625..2242864 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KKZ10_RS10865 (2242864) | 2242864..2243151 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KKZ10_RS10870 (2243223) | 2243223..2243378 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KKZ10_RS10875 (2243595) | 2243595..2243846 | + | 252 | WP_000980994.1 | protein Rem | - |
| KKZ10_RS10880 (2243913) | 2243913..2244191 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| KKZ10_RS10885 (2244193) | 2244193..2245242 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| KKZ10_RS10890 (2245256) | 2245256..2246008 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KKZ10_RS10895 (2246286) | 2246286..2246375 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| KKZ10_RS10900 (2246430) | 2246430..2246642 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KKZ10_RS10905 (2246943) | 2246943..2247158 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KKZ10_RS10910 (2247522) | 2247522..2247692 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| KKZ10_RS10915 (2247912) | 2247912..2248127 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KKZ10_RS10920 (2248132) | 2248132..2248443 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| KKZ10_RS10925 (2248440) | 2248440..2248973 | + | 534 | WP_001092971.1 | lysozyme | - |
| KKZ10_RS10930 (2248970) | 2248970..2249467 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KKZ10_RS10935 (2249830) | 2249830..2250042 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KKZ10_RS10940 (2250053) | 2250053..2250241 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KKZ10_RS10945 (2250244) | 2250244..2250309 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| KKZ10_RS10950 (2250389) | 2250389..2250544 | + | 156 | WP_001309517.1 | protein YnfN | - |
| KKZ10_RS10955 (2250716) | 2250716..2250889 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KKZ10_RS10960 (2251462) | 2251462..2252007 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| KKZ10_RS10965 (2251982) | 2251982..2252551 | + | 570 | Protein_2141 | phage terminase large subunit family protein | - |
| KKZ10_RS10970 (2252551) | 2252551..2252811 | + | 261 | Protein_2142 | phage minor tail protein G | - |
| KKZ10_RS10975 (2252793) | 2252793..2253227 | + | 435 | WP_000459465.1 | phage tail assembly protein T | - |
| KKZ10_RS10980 (2253289) | 2253289..2254023 | + | 735 | Protein_2144 | phage tail protein | - |
| KKZ10_RS10985 (2254023) | 2254023..2254598 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| KKZ10_RS10990 (2254696) | 2254696..2255286 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KKZ10_RS10995 (2255603) | 2255603..2255836 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KKZ10_RS11000 (2255905) | 2255905..2256018 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KKZ10_RS11005 (2256539) | 2256539..2257906 | + | 1368 | Protein_2149 | MHS family MFS transporter | - |
| KKZ10_RS11010 (2257995) | 2257995..2259455 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| KKZ10_RS11015 (2259490) | 2259490..2259693 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KKZ10_RS11020 (2259870) | 2259870..2260556 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KKZ10_RS11025 (2260645) | 2260645..2261391 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| KKZ10_RS11030 (2261528) | 2261528..2263573 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| KKZ10_RS11035 (2263617) | 2263617..2264135 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0.009 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0.008 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0.008 |