MGE detailed information
MGE type: Prophage MGE length: 33462 bp
Accession: NZ_CP069386 Location: 261320..294781 Organism: Escherichia coli strain XH1815 Replicon: chromosome
Accession: NZ_CP069386 Location: 261320..294781 Organism: Escherichia coli strain XH1815 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSW75_RS01190 (257835) | 257835..258581 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| JSW75_RS01195 (258670) | 258670..259356 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| JSW75_RS01200 (259533) | 259533..259736 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JSW75_RS01205 (259771) | 259771..261231 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| JSW75_RS01210 (261320) | 261320..262687 | - | 1368 | Protein_242 | MHS family MFS transporter | - |
| JSW75_RS01215 (263208) | 263208..263321 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| JSW75_RS01220 (263390) | 263390..263623 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| JSW75_RS01230 (263940) | 263940..264531 | + | 592 | Protein_245 | recombinase family protein | - |
| JSW75_RS01235 (264629) | 264629..265203 | - | 575 | Protein_246 | tail fiber assembly protein | - |
| JSW75_RS01240 (265203) | 265203..266165 | - | 963 | WP_001027733.1 | phage tail protein | - |
| JSW75_RS01245 (266116) | 266116..266685 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| JSW75_RS01250 (267074) | 267074..267307 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| JSW75_RS01255 (267365) | 267365..267775 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| JSW75_RS01260 (267927) | 267927..268100 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| JSW75_RS01265 (268272) | 268272..268427 | - | 156 | WP_001309517.1 | protein YnfN | - |
| JSW75_RS01270 (268506) | 268506..268571 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| JSW75_RS01275 (268574) | 268574..268762 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| JSW75_RS01280 (268773) | 268773..268985 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| JSW75_RS01285 (269348) | 269348..269845 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| JSW75_RS01290 (269842) | 269842..270375 | - | 534 | WP_001092971.1 | lysozyme | - |
| JSW75_RS01295 (270372) | 270372..270683 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| JSW75_RS01300 (270688) | 270688..270903 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| JSW75_RS01305 (271123) | 271123..271293 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| JSW75_RS01310 (271657) | 271657..271872 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| JSW75_RS01315 (272173) | 272173..272385 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| JSW75_RS01320 (272440) | 272440..272529 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| JSW75_RS01325 (272807) | 272807..273559 | - | 753 | WP_001047135.1 | antitermination protein | - |
| JSW75_RS01330 (273573) | 273573..274622 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| JSW75_RS01335 (274624) | 274624..274902 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| JSW75_RS01340 (274969) | 274969..275220 | - | 252 | WP_000980994.1 | protein Rem | - |
| JSW75_RS01345 (275437) | 275437..275592 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JSW75_RS01350 (275664) | 275664..275951 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JSW75_RS01355 (275951) | 275951..276190 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JSW75_RS01360 (276215) | 276215..276520 | + | 306 | WP_001326990.1 | protein YdfV | - |
| JSW75_RS01365 (276723) | 276723..277055 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| JSW75_RS01370 (277492) | 277492..277641 | - | 150 | WP_011443592.1 | protein YdfW | - |
| JSW75_RS01375 (277676) | 277676..277954 | - | 279 | Protein_274 | hypothetical protein | - |
| JSW75_RS01380 (277938) | 277938..278168 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| JSW75_RS01385 (278252) | 278252..278659 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| JSW75_RS01390 (278826) | 278826..278981 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| JSW75_RS01395 (279141) | 279141..279359 | + | 219 | WP_001171942.1 | protein YdfC | - |
| JSW75_RS01400 (279927) | 279927..280115 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| JSW75_RS01405 (280112) | 280112..280303 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| JSW75_RS01410 (280396) | 280396..281163 | + | 768 | Protein_281 | exonuclease | - |
| JSW75_RS01415 (281160) | 281160..281855 | + | 696 | Protein_282 | IS3-like element IS2 family transposase | - |
| JSW75_RS01420 (281869) | 281869..283026 | + | 1158 | Protein_283 | tyrosine-type recombinase/integrase | - |
| JSW75_RS01425 (283214) | 283214..284233 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| JSW75_RS01430 (284245) | 284245..285459 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| JSW75_RS01435 (285665) | 285665..285991 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| JSW75_RS01440 (286126) | 286126..286467 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| JSW75_RS01445 (286502) | 286502..287062 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JSW75_RS01450 (287065) | 287065..287775 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JSW75_RS01455 (287883) | 287883..288188 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| JSW75_RS01460 (288387) | 288387..290813 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| JSW75_RS01465 (290874) | 290874..293297 | + | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| JSW75_RS01470 (293308) | 293308..293925 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| JSW75_RS01475 (293927) | 293927..294781 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| JSW75_RS01480 (294824) | 294824..295438 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| JSW75_RS01485 (295597) | 295597..296889 | + | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| JSW75_RS01490 (296842) | 296842..297537 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| JSW75_RS01495 (297662) | 297662..298882 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0 |