MGE detailed information
MGE type: Prophage MGE length: 33462 bp
Accession: NZ_CP067994 Location: 2221463..2254924 Organism: Escherichia coli strain CV601 Replicon: chromosome
Accession: NZ_CP067994 Location: 2221463..2254924 Organism: Escherichia coli strain CV601 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJT18_RS10615 () | 2217362..2218582 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| JJT18_RS10620 () | 2218707..2219402 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| JJT18_RS10625 () | 2219355..2220647 | - | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| JJT18_RS10630 () | 2220806..2221420 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| JJT18_RS10635 () | 2221463..2222317 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| JJT18_RS10640 () | 2222319..2222936 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| JJT18_RS10645 () | 2222947..2225370 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| JJT18_RS10650 () | 2225431..2227857 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| JJT18_RS10655 () | 2228056..2228361 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| JJT18_RS10660 () | 2228469..2229179 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JJT18_RS10665 () | 2229182..2229742 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JJT18_RS10670 () | 2229777..2230118 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| JJT18_RS10675 () | 2230253..2230579 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| JJT18_RS10680 () | 2230785..2231999 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| JJT18_RS10685 () | 2232011..2233030 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| JJT18_RS10690 () | 2233088..2233198 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| JJT18_RS10695 () | 2233218..2234375 | - | 1158 | Protein_2087 | Putative defective protein IntQ ; Integrase | Integrase |
| JJT18_RS10700 () | 2234389..2235084 | - | 696 | Protein_2088 | IS3 family transposase IS2 | Transposase |
| JJT18_RS10705 () | 2235081..2235848 | - | 768 | Protein_2089 | exonuclease | - |
| JJT18_RS10710 () | 2235941..2236132 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| JJT18_RS10715 () | 2236129..2236317 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| JJT18_RS10720 () | 2236885..2237103 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| JJT18_RS10725 () | 2237263..2237418 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| JJT18_RS10730 () | 2237585..2237992 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| JJT18_RS10735 () | 2238076..2238306 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| JJT18_RS10740 () | 2238290..2238568 | + | 279 | Protein_2096 | hypothetical protein | - |
| JJT18_RS10745 () | 2238603..2238752 | + | 150 | WP_011443592.1 | hypothetical protein | - |
| JJT18_RS10750 () | 2239189..2239521 | - | 333 | WP_001301033.1 | protein FlxA | - |
| JJT18_RS10755 () | 2239724..2240029 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| JJT18_RS10760 () | 2240054..2240293 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JJT18_RS10765 () | 2240293..2240580 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JJT18_RS10770 () | 2240652..2240807 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JJT18_RS10775 () | 2241024..2241275 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| JJT18_RS10780 () | 2241342..2241620 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| JJT18_RS10785 () | 2241622..2242671 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| JJT18_RS10790 () | 2242685..2243437 | + | 753 | WP_001047135.1 | antitermination protein | - |
| JJT18_RS10795 () | 2243715..2243804 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| JJT18_RS10800 () | 2243859..2244071 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| JJT18_RS10805 () | 2244372..2244587 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| JJT18_RS10810 () | 2245341..2245556 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| JJT18_RS10815 () | 2245561..2245872 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| JJT18_RS10820 () | 2245869..2246402 | + | 534 | WP_001092971.1 | lysozyme | - |
| JJT18_RS10825 () | 2246399..2246896 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| JJT18_RS10830 () | 2247259..2247471 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| JJT18_RS10835 () | 2247482..2247670 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| JJT18_RS10840 () | 2247673..2247738 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| JJT18_RS10845 () | 2247817..2247972 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| JJT18_RS10850 () | 2248144..2248317 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| JJT18_RS10855 () | 2248469..2248879 | - | 411 | WP_201178813.1 | DUF1398 domain-containing protein | - |
| JJT18_RS10860 () | 2248937..2249170 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| JJT18_RS10865 () | 2249559..2250128 | + | 570 | WP_000453588.1 | DNA-packaging protein | - |
| JJT18_RS10870 () | 2250079..2251041 | + | 963 | WP_001027733.1 | phage tail protein | - |
| JJT18_RS10875 () | 2251041..2251616 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| JJT18_RS10880 () | 2251714..2252304 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| JJT18_RS10885 () | 2252621..2252854 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| JJT18_RS10890 () | 2252923..2253036 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| JJT18_RS10895 () | 2253557..2254924 | + | 1368 | Protein_2127 | MHS family MFS transporter | - |
| JJT18_RS10900 () | 2255013..2256473 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| JJT18_RS10905 () | 2256508..2256711 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JJT18_RS10910 () | 2256888..2257574 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| JJT18_RS10915 () | 2257663..2258409 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0 |