MGE detailed information
MGE type: Conjugative plasmid MGE length: 127534 bp
Accession: NZ_CP066845 Location: 1..127534 Organism: Escherichia coli strain Z30 Replicon: plasmid pZ30-TEM-1B
Accession: NZ_CP066845 Location: 1..127534 Organism: Escherichia coli strain Z30 Replicon: plasmid pZ30-TEM-1B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JHL13_RS22715 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| JHL13_RS22720 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| JHL13_RS22725 (2124) | 2124..2312 | - | 189 | WP_001324033.1 | hypothetical protein | - |
| JHL13_RS22730 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| JHL13_RS22735 (3657) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| JHL13_RS22740 (5199) | 5199..5342 | - | 144 | Protein_5 | omptin family outer membrane protease | - |
| JHL13_RS22745 (5379) | 5379..6578 | - | 1200 | Protein_6 | IS3 family transposase IS629 | Transposase |
| JHL13_RS22750 (6633) | 6633..10094 | - | 3462 | Protein_7 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| JHL13_RS22755 (10265) | 10265..10456 | + | 192 | Protein_8 | IS91 family transposase | - |
| JHL13_RS22765 (10735) | 10735..10992 | + | 258 | Protein_9 | IS3 family transposase IS911 | Transposase |
| JHL13_RS22770 (11060) | 11060..12211 | + | 1152 | WP_001442799.1 | IS30 family transposase IS30D | Transposase |
| JHL13_RS22775 (12333) | 12333..12698 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| JHL13_RS22780 (12698) | 12698..13813 | + | 1116 | Protein_12 | IS91 family transposase IS91 | Transposase |
| JHL13_RS22785 (13994) | 13994..14338 | - | 345 | WP_001553768.1 | hypothetical protein | - |
| JHL13_RS22790 (15196) | 15196..16947 | - | 1752 | Protein_14 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| JHL13_RS22795 (16951) | 16951..17343 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| JHL13_RS22800 (17481) | 17481..18365 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| JHL13_RS22805 (18397) | 18397..19596 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| JHL13_RS22810 (19702) | 19702..20352 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| JHL13_RS22815 (20384) | 20384..20626 | - | 243 | WP_000844627.1 | transposase | - |
| JHL13_RS22820 (20684) | 20684..22198 | - | 1515 | Protein_20 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| JHL13_RS22825 (22264) | 22264..22968 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JHL13_RS22830 (23416) | 23416..24429 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| JHL13_RS22835 (24585) | 24585..25058 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| JHL13_RS22840 (25128) | 25128..25832 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JHL13_RS22845 (25886) | 25886..26200 | + | 315 | Protein_25 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| JHL13_RS22850 (26203) | 26203..29169 | + | 2967 | WP_001138070.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| JHL13_RS22855 (29248) | 29248..30252 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| JHL13_RS22860 (30524) | 30524..30610 | - | 87 | Protein_28 | Arm DNA-binding domain-containing protein | - |
| JHL13_RS22865 (30940) | 30940..31755 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| JHL13_RS22870 (31816) | 31816..32619 | + | 804 | WP_001082320.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| JHL13_RS22875 (32619) | 32619..33455 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| JHL13_RS22880 (33686) | 33686..34546 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| JHL13_RS22885 (34729) | 34729..35286 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| JHL13_RS22890 (35450) | 35450..38455 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JHL13_RS22895 (38388) | 38388..38853 | - | 466 | Protein_35 | plasmid replication initiator RepA | - |
| JHL13_RS22900 (38846) | 38846..39328 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| JHL13_RS22905 (39321) | 39321..39368 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| JHL13_RS22910 (39359) | 39359..39610 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| JHL13_RS22915 (39627) | 39627..39884 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| JHL13_RS22920 (40168) | 40168..40317 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (40361) | 40361..40422 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (40361) | 40361..40422 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (40361) | 40361..40422 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (40361) | 40361..40422 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| JHL13_RS22925 (40678) | 40678..40752 | - | 75 | Protein_41 | endonuclease | - |
| JHL13_RS22930 (40998) | 40998..41210 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| JHL13_RS22935 (41346) | 41346..41906 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| JHL13_RS22940 (42009) | 42009..42869 | - | 861 | WP_000704513.1 | putative protein YcjY | VF |
| JHL13_RS22945 (42928) | 42928..43674 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| JHL13_RS22950 (43694) | 43694..48964 | - | 5271 | WP_000986963.1 | Multifunctional conjugation protein TraI | Relaxase |
| JHL13_RS22955 (49046) | 49046..49273 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | - |
| JHL13_RS22960 (49273) | 49273..49671 | + | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JHL13_RS22965 (49680) | 49680..51833 | - | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| JHL13_RS22970 (52086) | 52086..52817 | - | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
| JHL13_RS22975 (52849) | 52849..53346 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
| JHL13_RS22980 (53362) | 53362..56184 | - | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| JHL13_RS22985 (56181) | 56181..57554 | - | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
| JHL13_RS22990 (57554) | 57554..57934 | - | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
| JHL13_RS22995 (57921) | 57921..58262 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| JHL13_RS23000 (58192) | 58192..58737 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JHL13_RS23005 (58724) | 58724..59008 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JHL13_RS23010 (59089) | 59089..59403 | + | 315 | WP_001324103.1 | hypothetical protein | - |
| JHL13_RS23015 (59405) | 59405..59752 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| JHL13_RS23020 (59768) | 59768..60511 | - | 744 | WP_001030377.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JHL13_RS23025 (60504) | 60504..60761 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| JHL13_RS23030 (60788) | 60788..62596 | - | 1809 | WP_000821838.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JHL13_RS23035 (62593) | 62593..63231 | - | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JHL13_RS23040 (63240) | 63240..64232 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| JHL13_RS23045 (64229) | 64229..64861 | - | 633 | WP_001203717.1 | type-F conjugative transfer system protein TraW | - |
| JHL13_RS23050 (64858) | 64858..65244 | - | 387 | WP_000099691.1 | type-F conjugative transfer system protein TrbI | - |
| JHL13_RS23055 (65241) | 65241..67868 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| JHL13_RS23060 (68028) | 68028..68249 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| JHL13_RS23065 (68384) | 68384..68899 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JHL13_RS23070 (68896) | 68896..69147 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| JHL13_RS23075 (69159) | 69159..69356 | - | 198 | WP_024179215.1 | conjugal transfer protein TrbD | - |
| JHL13_RS23080 (69343) | 69343..69933 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| JHL13_RS23085 (69923) | 69923..71350 | - | 1428 | WP_000146684.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| JHL13_RS23090 (71350) | 71350..72078 | - | 729 | WP_001230813.1 | type-F conjugative transfer system secretin TraK | - |
| JHL13_RS23095 (72065) | 72065..72631 | - | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| JHL13_RS23100 (72653) | 72653..72964 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| JHL13_RS23105 (72979) | 72979..73344 | - | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| JHL13_RS23110 (73387) | 73387..73602 | - | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| JHL13_RS23115 (73738) | 73738..74385 | - | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| JHL13_RS23120 (74577) | 74577..74960 | - | 384 | WP_072647915.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JHL13_RS23125 (75312) | 75312..75902 | + | 591 | WP_166494936.1 | hypothetical protein | VF |
| JHL13_RS23130 (76197) | 76197..77018 | - | 822 | WP_001234475.1 | DUF932 domain-containing protein | - |
| JHL13_RS23135 (77137) | 77137..77424 | - | 288 | WP_000107546.1 | hypothetical protein | - |
| JHL13_RS23140 (77741) | 77741..78019 | + | 279 | Protein_84 | hypothetical protein | - |
| JHL13_RS23145 (78320) | 78320..78445 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| JHL13_RS23150 (78387) | 78387..78536 | - | 150 | Protein_86 | DUF5431 family protein | - |
| - (78543) | 78543..78741 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (78543) | 78543..78741 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (78543) | 78543..78741 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (78543) | 78543..78741 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| JHL13_RS23155 (78710) | 78710..79472 | - | 763 | Protein_87 | plasmid SOS inhibition protein A | - |
| JHL13_RS23160 (79469) | 79469..79903 | - | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| JHL13_RS23165 (79958) | 79958..81916 | - | 1959 | WP_029487628.1 | ParB/RepB/Spo0J family partition protein | - |
| JHL13_RS23170 (81982) | 81982..82215 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| JHL13_RS23175 (82272) | 82272..82811 | - | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
| JHL13_RS23180 (83129) | 83129..83638 | + | 510 | WP_071600123.1 | hypothetical protein | - |
| JHL13_RS23185 (83608) | 83608..83799 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| JHL13_RS23190 (83796) | 83796..84218 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| JHL13_RS23195 (84265) | 84265..84690 | - | 426 | WP_001198918.1 | antirestriction protein | - |
| JHL13_RS23200 (85103) | 85103..85879 | - | 777 | WP_001005035.1 | hypothetical protein | - |
| JHL13_RS23205 (85925) | 85925..86479 | - | 555 | WP_077248347.1 | DUF1380 family protein | - |
| JHL13_RS23210 (86373) | 86373..86594 | - | 222 | WP_001104870.1 | hypothetical protein | - |
| JHL13_RS23215 (86595) | 86595..87278 | - | 684 | WP_000085939.1 | DNA methylase | - |
| JHL13_RS23220 (87355) | 87355..87660 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| JHL13_RS23225 (87664) | 87664..88565 | - | 902 | Protein_101 | DUF1281 domain-containing protein | - |
| JHL13_RS23230 (89475) | 89475..90446 | - | 972 | WP_000817035.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| JHL13_RS23235 (90446) | 90446..91612 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| JHL13_RS23240 (92200) | 92200..92955 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| JHL13_RS23245 (93707) | 93707..94513 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| JHL13_RS23250 (94514) | 94514..94819 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JHL13_RS23255 (94821) | 94821..95039 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| JHL13_RS23260 (95607) | 95607..96119 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| JHL13_RS23265 (96153) | 96153..97286 | - | 1134 | WP_000545984.1 | DUF3800 domain-containing protein | - |
| JHL13_RS23270 (97453) | 97453..98226 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| JHL13_RS23275 (98239) | 98239..98739 | - | 501 | WP_000528932.1 | HEPN family nuclease | - |
| JHL13_RS23280 (99004) | 99004..99234 | + | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| JHL13_RS23285 (99231) | 99231..99647 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JHL13_RS23290 (99692) | 99692..103486 | - | 3795 | WP_001144731.1 | hypothetical protein | - |
| JHL13_RS23295 (103867) | 103867..104097 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| JHL13_RS23300 (104094) | 104094..104510 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JHL13_RS23305 (104585) | 104585..106150 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| JHL13_RS23310 (106135) | 106135..107157 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| JHL13_RS23320 (108488) | 108488..110689 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| JHL13_RS23325 (110715) | 110715..112048 | - | 1334 | Protein_121 | L-lysine N6-monooxygenase | VF |
| JHL13_RS23330 (112045) | 112045..113787 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| JHL13_RS23335 (113787) | 113787..114734 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| JHL13_RS23340 (114735) | 114735..116459 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| JHL13_RS23345 (116595) | 116595..117788 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| JHL13_RS23350 (118168) | 118168..118548 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| JHL13_RS23355 (118889) | 118889..119302 | - | 414 | Protein_127 | phosphopyruvate hydratase | - |
| JHL13_RS23360 (119791) | 119791..120648 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| JHL13_RS23365 (120645) | 120645..121502 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| JHL13_RS23370 (121499) | 121499..122326 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| JHL13_RS23375 (122326) | 122326..123042 | - | 717 | Protein_131 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| JHL13_RS23385 (124356) | 124356..124553 | - | 198 | Protein_133 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| JHL13_RS23390 (124909) | 124909..125606 | + | 698 | WP_223155668.1 | IS1 family transposase IS1S | Transposase |
| JHL13_RS23395 (125786) | 125786..126299 | - | 514 | Protein_135 | DUF4113 domain-containing protein | - |
| JHL13_RS23400 (126360) | 126360..126464 | - | 105 | Protein_136 | AAA family ATPase | - |
| JHL13_RS23405 (126466) | 126466..126789 | - | 324 | Protein_137 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|