MGE detailed information
MGE type: Genomic_island MGE length: 23919 bp
Accession: NZ_CP066796 Location: 448854..472772 Organism: Erwinia amylovora strain ATCC 15580 Replicon: chromosome
Accession: NZ_CP066796 Location: 448854..472772 Organism: Erwinia amylovora strain ATCC 15580 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JGC47_RS02075 () | 444775..446052 | - | 1278 | WP_004155165.1 | DUF445 family protein | - |
| JGC47_RS02080 () | 446054..447553 | - | 1500 | WP_004155166.1 | DUF853 domain-containing protein | - |
| JGC47_RS02085 () | 447724..448233 | - | 510 | WP_004155168.1 | DUF2501 domain-containing protein | - |
| JGC47_RS02095 () | 448854..450131 | + | 1278 | WP_004155169.1 | Prophage integrase IntA ; Integrase | Integrase |
| JGC47_RS02100 () | 450367..452013 | + | 1647 | WP_004155171.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| JGC47_RS02105 () | 452018..453340 | + | 1323 | WP_004155172.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| JGC47_RS02110 () | 453321..458401 | + | 5081 | Protein_412 | DNA phosphorothioation-dependent restriction protein DptH | - |
| JGC47_RS02115 () | 458398..459219 | + | 822 | WP_004155174.1 | restriction endonuclease | - |
| JGC47_RS02120 () | 459424..460787 | - | 1364 | Protein_414 | methyltransferase domain-containing protein | - |
| JGC47_RS02125 () | 460792..461145 | - | 354 | WP_009349902.1 | DNA sulfur modification protein DndE | - |
| JGC47_RS02130 () | 461145..463145 | - | 2001 | WP_004155177.1 | DNA sulfur modification protein DndD | - |
| JGC47_RS02135 () | 463135..464769 | - | 1635 | WP_004155178.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| JGC47_RS02140 () | 464766..465851 | - | 1086 | WP_004155179.1 | DNA sulfur modification protein DndB | - |
| JGC47_RS02145 () | 466051..466645 | - | 595 | Protein_419 | hypothetical protein | - |
| JGC47_RS02150 () | 466753..466950 | - | 198 | WP_004155182.1 | AlpA family phage regulatory protein | - |
| JGC47_RS02155 () | 468160..468402 | + | 243 | WP_004155184.1 | hypothetical protein | - |
| JGC47_RS02160 () | 468627..469201 | + | 575 | Protein_422 | DUF932 domain-containing protein | - |
| JGC47_RS02165 () | 469272..469742 | + | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| JGC47_RS02170 () | 469755..470078 | + | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JGC47_RS02175 () | 470115..470435 | + | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| JGC47_RS02180 () | 470548..471381 | + | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| JGC47_RS02185 () | 471478..471726 | + | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| JGC47_RS02190 () | 471730..472005 | + | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JGC47_RS02195 () | 472424..472624 | + | 201 | Protein_429 | IS3 family transposase IS1400 | Transposase |
| JGC47_RS02200 () | 472620..472772 | + | 153 | WP_004163933.1 | IS3 family transposase IS1351 | Transposase |
| JGC47_RS02205 () | 472921..476286 | - | 3366 | WP_004155194.1 | ATP-binding protein | - |
| JGC47_RS02210 () | 476673..477230 | + | 558 | WP_004155195.1 | YecA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0.001 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA10128, TA294492 | NZ_NQJO01000001 | 3404618..3427747 | 0.001 |