MGE detailed information
MGE type: Genomic_island MGE length: 23921 bp
Accession: NZ_CP064855 Location: 449316..473236 Organism: Erwinia amylovora strain Ea1/79Sm Replicon: chromosome
Accession: NZ_CP064855 Location: 449316..473236 Organism: Erwinia amylovora strain Ea1/79Sm Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IYV53_RS02070 () | 445237..446514 | - | 1278 | WP_004155165.1 | DUF445 family protein | - |
| IYV53_RS02075 () | 446516..448015 | - | 1500 | WP_004155166.1 | DUF853 domain-containing protein | - |
| IYV53_RS02080 () | 448186..448695 | - | 510 | WP_004155168.1 | DUF2501 domain-containing protein | - |
| IYV53_RS02090 () | 449316..450593 | + | 1278 | WP_004155169.1 | Prophage integrase IntA ; Integrase | Integrase |
| IYV53_RS02095 () | 450829..452475 | + | 1647 | WP_004155171.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| IYV53_RS02100 () | 452480..453802 | + | 1323 | WP_004155172.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| IYV53_RS02105 () | 453783..458864 | + | 5082 | WP_004155173.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| IYV53_RS02110 () | 458861..459682 | + | 822 | WP_004155174.1 | restriction endonuclease | - |
| IYV53_RS02115 () | 459887..461251 | - | 1365 | WP_004165146.1 | methyltransferase domain-containing protein | - |
| IYV53_RS02120 () | 461256..461609 | - | 354 | WP_009349902.1 | DNA sulfur modification protein DndE | - |
| IYV53_RS02125 () | 461609..463609 | - | 2001 | WP_004155177.1 | DNA sulfur modification protein DndD | - |
| IYV53_RS02130 () | 463599..465233 | - | 1635 | WP_004155178.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| IYV53_RS02135 () | 465230..466315 | - | 1086 | WP_004155179.1 | DNA sulfur modification protein DndB | - |
| IYV53_RS02140 () | 466515..467109 | - | 595 | Protein_418 | hypothetical protein | - |
| IYV53_RS02145 () | 467217..467414 | - | 198 | WP_004155182.1 | AlpA family phage regulatory protein | - |
| IYV53_RS02150 () | 468624..468866 | + | 243 | WP_004155184.1 | hypothetical protein | - |
| IYV53_RS02155 () | 469091..469665 | + | 575 | Protein_421 | DUF932 domain-containing protein | - |
| IYV53_RS02160 () | 469736..470206 | + | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| IYV53_RS02165 () | 470219..470542 | + | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| IYV53_RS02170 () | 470579..470899 | + | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| IYV53_RS02175 () | 471012..471845 | + | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| IYV53_RS02180 () | 471942..472190 | + | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| IYV53_RS02185 () | 472194..472469 | + | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IYV53_RS02190 () | 472888..473088 | + | 201 | Protein_428 | IS3 family transposase IS1400 | Transposase |
| IYV53_RS02195 () | 473084..473236 | + | 153 | WP_004163933.1 | IS3 family transposase IS1351 | Transposase |
| IYV53_RS02200 () | 473385..476750 | - | 3366 | WP_004155194.1 | ATP-binding protein | - |
| IYV53_RS02205 () | 477137..477694 | + | 558 | WP_004155195.1 | YecA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0.001 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA10128, TA294492 | NZ_NQJO01000001 | 3404618..3427747 | 0.001 |