MGE detailed information
MGE type: Integron MGE length: 92451 bp
Accession: NZ_CP053805 Location: 309752..402202 Organism: Vibrio cholerae strain SL6Y Replicon: chromosome
Accession: NZ_CP053805 Location: 309752..402202 Organism: Vibrio cholerae strain SL6Y Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPY06_RS14415 () | 305070..306200 | + | 1131 | WP_175231316.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| HPY06_RS14420 () | 306494..308422 | + | 1929 | WP_108336265.1 | threonine--tRNA ligase | - |
| HPY06_RS14425 () | 308426..308977 | + | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| HPY06_RS14430 () | 309081..309275 | + | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| HPY06_RS14435 () | 309317..309670 | + | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| HPY06_RS14440 () | 309752..310714 | - | 963 | WP_175231319.1 | IS91 family transposase ISAzo26 | Transposase |
| HPY06_RS14445 () | 311116..311269 | + | 154 | Protein_255 | DUF645 family protein | - |
| HPY06_RS14450 () | 311470..311880 | + | 411 | WP_175231321.1 | hypothetical protein | - |
| HPY06_RS14455 () | 311910..312869 | - | 960 | WP_175231324.1 | IS30 family transposase ISVvu6 | Transposase |
| HPY06_RS14460 () | 313115..313705 | + | 591 | WP_175231326.1 | hypothetical protein | - |
| HPY06_RS14465 () | 313847..314281 | + | 435 | WP_059261346.1 | hypothetical protein | - |
| HPY06_RS14470 () | 314400..314711 | - | 312 | WP_095474019.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY06_RS14475 () | 314708..314950 | - | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| HPY06_RS14480 () | 315166..315921 | + | 756 | WP_175231329.1 | hypothetical protein | - |
| HPY06_RS14485 () | 316133..316846 | + | 714 | WP_000123659.1 | Fic family protein | - |
| HPY06_RS14490 () | 316963..317262 | - | 300 | WP_000802134.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY06_RS14495 () | 317259..317501 | - | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| HPY06_RS14500 () | 317740..318810 | + | 1071 | WP_094132855.1 | hypothetical protein | - |
| HPY06_RS14505 () | 318804..318917 | + | 114 | Protein_267 | DUF3265 domain-containing protein | - |
| HPY06_RS14510 () | 319104..319319 | + | 216 | WP_154139263.1 | DUF645 family protein | - |
| HPY06_RS14515 () | 319496..319909 | + | 414 | WP_095475342.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS14520 () | 320169..320405 | + | 237 | WP_175231332.1 | DUF645 family protein | - |
| HPY06_RS14525 () | 320758..320911 | + | 154 | Protein_271 | DUF645 family protein | - |
| HPY06_RS14530 () | 321114..321578 | + | 465 | WP_002033245.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS14535 () | 321717..322316 | + | 600 | WP_095464298.1 | hypothetical protein | - |
| HPY06_RS14540 () | 322477..323355 | + | 879 | WP_175231334.1 | hypothetical protein | - |
| HPY06_RS14545 () | 323500..323952 | + | 453 | WP_102887665.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS14550 () | 323949..324059 | + | 111 | WP_161458023.1 | DUF3265 domain-containing protein | - |
| HPY06_RS14555 () | 324081..324764 | + | 684 | WP_113629338.1 | DUF4238 domain-containing protein | - |
| HPY06_RS14560 () | 324764..324880 | + | 117 | WP_113629344.1 | DUF3265 domain-containing protein | - |
| HPY06_RS14565 () | 324908..325420 | + | 513 | WP_175231337.1 | hypothetical protein | - |
| HPY06_RS14570 () | 325570..325866 | + | 297 | WP_027694836.1 | Dabb family protein | - |
| HPY06_RS14575 () | 326023..326529 | + | 507 | WP_000403019.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS14580 () | 326726..327409 | + | 684 | WP_102787193.1 | hypothetical protein | - |
| HPY06_RS14585 () | 327593..328234 | + | 642 | WP_175231339.1 | FMN-binding negative transcriptional regulator | - |
| HPY06_RS14590 () | 328373..328726 | + | 354 | WP_175231342.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| HPY06_RS14595 () | 328723..328833 | + | 111 | WP_175231855.1 | DUF3265 domain-containing protein | - |
| HPY06_RS14600 () | 329344..330354 | + | 1011 | WP_175231345.1 | hypothetical protein | - |
| HPY06_RS14605 () | 330648..330830 | + | 183 | WP_057570823.1 | DUF645 family protein | - |
| HPY06_RS14610 () | 331065..331331 | + | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| HPY06_RS14615 () | 331318..331563 | + | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| HPY06_RS14620 () | 331953..332045 | + | 93 | Protein_290 | DUF645 family protein | - |
| HPY06_RS14625 () | 332244..332684 | + | 441 | WP_114774848.1 | hypothetical protein | - |
| HPY06_RS14630 () | 332919..333410 | + | 492 | WP_069648535.1 | hypothetical protein | - |
| HPY06_RS14635 () | 333545..333967 | + | 423 | WP_099612058.1 | hypothetical protein | - |
| HPY06_RS14640 () | 334258..334411 | + | 154 | Protein_294 | DUF645 family protein | - |
| HPY06_RS14645 () | 334628..335320 | + | 693 | Protein_295 | hypothetical protein | - |
| HPY06_RS14650 () | 335490..336557 | + | 1068 | WP_175231348.1 | hypothetical protein | - |
| HPY06_RS14655 () | 336699..337313 | + | 615 | WP_101411729.1 | hypothetical protein | - |
| HPY06_RS14660 () | 337314..337430 | + | 117 | WP_080299869.1 | DUF3265 domain-containing protein | - |
| HPY06_RS14665 () | 337459..337734 | + | 276 | WP_019283461.1 | antibiotic biosynthesis monooxygenase | - |
| HPY06_RS14670 () | 337839..337991 | + | 153 | WP_175231857.1 | DUF3709 domain-containing protein | - |
| HPY06_RS14675 () | 338012..338245 | + | 234 | WP_114763551.1 | DUF3709 domain-containing protein | - |
| HPY06_RS14680 () | 338510..338980 | - | 471 | WP_000784954.1 | RES family NAD+ phosphorylase | - |
| HPY06_RS14685 () | 338980..339432 | - | 453 | WP_000024295.1 | DUF2384 domain-containing protein | - |
| HPY06_RS14690 () | 339657..339953 | + | 297 | WP_027694836.1 | Dabb family protein | - |
| HPY06_RS14695 () | 340108..340602 | + | 495 | WP_175231350.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS14700 () | 340738..341292 | + | 555 | WP_175231353.1 | hypothetical protein | - |
| HPY06_RS14705 () | 341436..341924 | + | 489 | WP_088132378.1 | hypothetical protein | - |
| HPY06_RS14710 () | 342073..343071 | + | 999 | WP_146779511.1 | hypothetical protein | - |
| HPY06_RS14715 () | 343229..343585 | + | 357 | WP_042988104.1 | hypothetical protein | - |
| HPY06_RS14720 () | 344297..344620 | + | 324 | WP_001886489.1 | DUF3709 domain-containing protein | - |
| HPY06_RS14725 () | 345209..345952 | + | 744 | WP_069648816.1 | hypothetical protein | - |
| HPY06_RS14730 () | 345936..346364 | + | 429 | WP_000082746.1 | hypothetical protein | - |
| HPY06_RS14735 () | 346684..346837 | + | 154 | Protein_313 | DUF645 family protein | - |
| HPY06_RS14740 () | 347037..347648 | + | 612 | WP_095430815.1 | hypothetical protein | - |
| HPY06_RS14745 () | 347642..347767 | + | 126 | WP_142741543.1 | DUF3265 domain-containing protein | - |
| HPY06_RS14750 () | 347813..348208 | + | 396 | WP_065818837.1 | DUF3465 domain-containing protein | - |
| HPY06_RS14755 () | 348581..348694 | + | 114 | Protein_317 | DUF645 family protein | - |
| HPY06_RS14760 () | 348898..349797 | + | 900 | WP_001887493.1 | hypothetical protein | - |
| HPY06_RS14765 () | 349987..350310 | + | 324 | WP_175231122.1 | hypothetical protein | - |
| HPY06_RS14770 () | 350536..350937 | + | 402 | WP_095482480.1 | hypothetical protein | - |
| HPY06_RS14775 () | 351065..351226 | + | 162 | WP_175231355.1 | hypothetical protein | - |
| HPY06_RS14780 () | 351415..351525 | + | 111 | WP_076025865.1 | DUF3265 domain-containing protein | - |
| HPY06_RS14785 () | 351547..352035 | + | 489 | WP_000110024.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS14790 () | 352175..352936 | + | 762 | WP_134987519.1 | hypothetical protein | - |
| HPY06_RS14795 () | 353069..353605 | + | 537 | WP_002053840.1 | nucleotidyltransferase family protein | - |
| HPY06_RS14800 () | 353900..354082 | + | 183 | WP_000923156.1 | DUF645 family protein | - |
| HPY06_RS14805 () | 354433..354586 | + | 154 | Protein_327 | DUF645 family protein | - |
| HPY06_RS14810 () | 354784..355524 | + | 741 | WP_175231358.1 | hypothetical protein | - |
| HPY06_RS14815 () | 355669..356088 | + | 420 | WP_042988309.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS14820 () | 356345..356605 | + | 261 | WP_175231859.1 | DUF3709 domain-containing protein | - |
| HPY06_RS14825 () | 356893..357288 | + | 396 | WP_175231361.1 | cell envelope integrity protein TolA | - |
| HPY06_RS14830 () | 357520..357807 | + | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY06_RS14835 () | 357818..358135 | + | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| HPY06_RS14840 () | 358287..358745 | + | 459 | WP_095472531.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS14845 () | 358911..359597 | + | 687 | WP_175231364.1 | hypothetical protein | - |
| HPY06_RS14850 () | 359909..360088 | + | 180 | WP_158160344.1 | DUF645 family protein | - |
| HPY06_RS14855 () | 360205..360291 | + | 87 | WP_149145581.1 | acetyltransferase | - |
| HPY06_RS14860 () | 360288..360584 | + | 297 | Protein_338 | Dabb family protein | - |
| HPY06_RS14865 () | 360738..361253 | + | 516 | WP_175231367.1 | dTDP-fucosamine acetyltransferase | VF |
| HPY06_RS14870 () | 361390..362178 | + | 789 | WP_175231370.1 | HNH endonuclease | - |
| HPY06_RS14875 () | 362288..362668 | + | 381 | WP_175231861.1 | MmcQ/YjbR family DNA-binding protein | - |
| HPY06_RS14880 () | 362907..363143 | + | 237 | WP_002051081.1 | DUF645 family protein | - |
| HPY06_RS14885 () | 363372..364229 | + | 858 | WP_175231373.1 | hypothetical protein | - |
| HPY06_RS14890 () | 364226..364336 | + | 111 | WP_175231863.1 | DUF3265 domain-containing protein | - |
| HPY06_RS14895 () | 364382..365050 | + | 669 | WP_094393080.1 | hypothetical protein | - |
| HPY06_RS14900 () | 365023..365157 | + | 135 | WP_095470702.1 | DUF3265 domain-containing protein | - |
| HPY06_RS14905 () | 365167..365397 | + | 231 | WP_175231375.1 | DUF1289 domain-containing protein | - |
| HPY06_RS14910 () | 365676..366074 | - | 399 | WP_175231378.1 | hypothetical protein | - |
| HPY06_RS14915 () | 366287..366652 | + | 366 | WP_175231381.1 | hypothetical protein | - |
| HPY06_RS14920 () | 367087..367271 | + | 185 | Protein_350 | hypothetical protein | - |
| HPY06_RS14925 () | 367548..367877 | + | 330 | Protein_351 | hypothetical protein | - |
| HPY06_RS14930 () | 368024..368488 | + | 465 | WP_114806832.1 | N-acetyltransferase | - |
| HPY06_RS14935 () | 368639..369010 | + | 372 | WP_118089050.1 | hypothetical protein | - |
| HPY06_RS14940 () | 369318..369500 | + | 183 | WP_002022258.1 | DUF645 family protein | - |
| HPY06_RS14945 () | 370000..370146 | + | 147 | WP_175231384.1 | DUF3265 domain-containing protein | - |
| HPY06_RS14950 () | 370174..370674 | + | 501 | WP_175231387.1 | NAD(P)H-dependent oxidoreductase | - |
| HPY06_RS14955 () | 371024..371119 | + | 96 | WP_001907607.1 | DUF645 family protein | - |
| HPY06_RS14960 () | 371483..371653 | + | 171 | WP_000483444.1 | DUF645 family protein | - |
| HPY06_RS14965 () | 371855..372511 | + | 657 | WP_175231391.1 | hypothetical protein | - |
| HPY06_RS14970 () | 372645..373511 | + | 867 | WP_175231396.1 | hypothetical protein | - |
| HPY06_RS14975 () | 373662..374294 | + | 633 | WP_175231400.1 | hypothetical protein | - |
| HPY06_RS14980 () | 374448..375098 | + | 651 | WP_175231404.1 | hypothetical protein | - |
| HPY06_RS14985 () | 375236..375835 | + | 600 | WP_113605299.1 | pentapeptide repeat-containing protein | - |
| HPY06_RS14990 () | 376016..376804 | + | 789 | WP_071180561.1 | hypothetical protein | - |
| HPY06_RS14995 () | 376801..376914 | + | 114 | WP_175231865.1 | DUF3265 domain-containing protein | - |
| HPY06_RS15000 () | 377425..377964 | + | 540 | WP_175231867.1 | hypothetical protein | - |
| HPY06_RS15005 () | 378146..378421 | + | 276 | WP_175231409.1 | DUF3709 domain-containing protein | - |
| HPY06_RS15010 () | 378766..379791 | + | 1026 | WP_175231413.1 | hypothetical protein | - |
| HPY06_RS15015 () | 379787..379909 | + | 123 | WP_175231869.1 | DUF3265 domain-containing protein | - |
| HPY06_RS15020 () | 379959..380402 | + | 444 | WP_000434669.1 | hypothetical protein | - |
| HPY06_RS15025 () | 380549..381187 | + | 639 | WP_002051085.1 | HD domain-containing protein | - |
| HPY06_RS15030 () | 381327..381962 | + | 636 | WP_000691786.1 | DUF2807 domain-containing protein | - |
| HPY06_RS15035 () | 382132..382527 | + | 396 | WP_000870862.1 | DUF3465 domain-containing protein | - |
| HPY06_RS15040 () | 382594..382707 | + | 114 | WP_175231417.1 | acetyltransferase | - |
| HPY06_RS15045 () | 382656..382937 | + | 282 | WP_080308613.1 | DUF1289 domain-containing protein | - |
| HPY06_RS15050 () | 383183..383632 | + | 450 | WP_001026802.1 | GyrI-like domain-containing protein | - |
| HPY06_RS15055 () | 383802..384284 | + | 483 | WP_032468092.1 | hypothetical protein | - |
| HPY06_RS15060 () | 384281..384784 | + | 504 | WP_001961624.1 | ImmA/IrrE family metallo-endopeptidase | - |
| HPY06_RS15065 () | 384897..385250 | + | 354 | WP_108694193.1 | DUF4144 domain-containing protein | - |
| HPY06_RS15070 () | 385322..385516 | + | 195 | WP_175231420.1 | DUF3709 domain-containing protein | - |
| HPY06_RS15075 () | 385543..385944 | + | 402 | WP_175231425.1 | hypothetical protein | - |
| HPY06_RS15080 () | 385923..386051 | + | 129 | WP_175231871.1 | DUF3265 domain-containing protein | - |
| HPY06_RS15085 () | 386088..386627 | + | 540 | WP_175231429.1 | hydrolase | - |
| HPY06_RS15090 () | 386786..387250 | + | 465 | WP_002033245.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS15095 () | 387538..387729 | + | 192 | WP_175231433.1 | DUF645 family protein | - |
| HPY06_RS15100 () | 387964..388230 | + | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| HPY06_RS15105 () | 388217..388462 | + | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| HPY06_RS15110 () | 388762..388944 | + | 183 | WP_057570823.1 | DUF645 family protein | - |
| HPY06_RS15115 () | 389145..389663 | + | 519 | WP_055028778.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS15120 () | 389903..390139 | + | 237 | WP_000868093.1 | DUF645 family protein | - |
| HPY06_RS15125 () | 390342..390806 | + | 465 | WP_002033245.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS15130 () | 390951..391718 | + | 768 | WP_175231437.1 | hypothetical protein | - |
| HPY06_RS15135 () | 391728..391838 | + | 111 | Protein_393 | DUF3265 domain-containing protein | - |
| HPY06_RS15140 () | 391922..392635 | + | 714 | WP_175231873.1 | Fic family protein | - |
| HPY06_RS15145 () | 392772..393614 | + | 843 | WP_175231441.1 | hypothetical protein | - |
| HPY06_RS15150 () | 393811..394608 | + | 798 | WP_175231445.1 | hypothetical protein | - |
| HPY06_RS15155 () | 394615..394701 | + | 87 | Protein_397 | DUF3265 domain-containing protein | - |
| HPY06_RS15160 () | 394837..395844 | + | 1008 | WP_175231449.1 | hypothetical protein | - |
| HPY06_RS15165 () | 396150..396303 | + | 154 | Protein_399 | DUF645 family protein | - |
| HPY06_RS15170 () | 396555..396812 | + | 258 | WP_175231453.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY06_RS15175 () | 396800..397102 | + | 303 | WP_175231458.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY06_RS15180 () | 397416..397598 | + | 183 | WP_114763558.1 | DUF645 family protein | - |
| HPY06_RS15185 () | 397749..398111 | + | 363 | WP_032473252.1 | DUF4144 domain-containing protein | - |
| HPY06_RS15190 () | 398272..398889 | + | 618 | WP_158001265.1 | SLATT domain-containing protein | - |
| HPY06_RS15195 () | 399031..399486 | + | 456 | WP_114717223.1 | hypothetical protein | - |
| HPY06_RS15200 () | 399783..399911 | + | 129 | WP_001886422.1 | DUF645 family protein | - |
| HPY06_RS15205 () | 399927..399965 | + | 39 | WP_108244118.1 | hypothetical protein | - |
| HPY06_RS15210 () | 400198..400434 | - | 237 | WP_000772130.1 | RNA-binding protein | - |
| HPY06_RS15215 () | 400727..401059 | - | 333 | WP_095482527.1 | SEC-C domain-containing protein | - |
| HPY06_RS15220 () | 401459..401641 | + | 183 | WP_113629350.1 | DUF645 family protein | - |
| HPY06_RS15225 () | 401855..402196 | + | 342 | Protein_411 | ATP-dependent RNA helicase HrpA | - |
| HPY06_RS15230 () | 402302..403342 | + | 1041 | WP_000903432.1 | IS481-like element ISVvu4 family transposase | - |
| HPY06_RS15235 () | 403403..404347 | - | 945 | WP_000247909.1 | ribosome biogenesis GTPase YlqF | - |
| HPY06_RS15240 () | 404669..406531 | + | 1863 | WP_175231461.1 | potassium transporter Kup | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|