MGE detailed information
MGE type: Integron MGE length: 11979 bp
Accession: NZ_CP053801 Location: 370413..382391 Organism: Vibrio cholerae strain SO5Y Replicon: chromosome
Accession: NZ_CP053801 Location: 370413..382391 Organism: Vibrio cholerae strain SO5Y Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPY15_RS15150 () | 365496..365678 | + | 183 | WP_046126209.1 | DUF645 family protein | - |
| HPY15_RS15155 () | 366033..366212 | + | 180 | WP_175235991.1 | DUF645 family protein | - |
| HPY15_RS15160 () | 366566..366773 | + | 208 | Protein_350 | DUF645 family protein | - |
| HPY15_RS15165 () | 367209..367544 | + | 336 | WP_046126207.1 | hypothetical protein | - |
| HPY15_RS15170 () | 367826..368062 | + | 237 | WP_080341691.1 | DUF3709 domain-containing protein | - |
| HPY15_RS15175 () | 368217..369176 | - | 960 | WP_001898459.1 | IS30 family transposase | - |
| HPY15_RS15180 () | 369515..370435 | + | 921 | WP_001896359.1 | IS5-like element ISVch8 family transposase | - |
| HPY15_RS15185 () | 370413..370937 | - | 525 | WP_142741359.1 | hypothetical protein | - |
| HPY15_RS15190 () | 371085..371822 | - | 738 | WP_046126202.1 | hypothetical protein | - |
| HPY15_RS15195 () | 371965..372313 | - | 349 | Protein_357 | GrpB family protein | - |
| HPY15_RS15200 () | 372576..373031 | - | 456 | WP_000432865.1 | hypothetical protein | - |
| HPY15_RS15205 () | 373182..373703 | - | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| HPY15_RS15210 () | 373697..373966 | - | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| HPY15_RS15215 () | 374218..374313 | - | 96 | WP_001907607.1 | DUF645 family protein | - |
| HPY15_RS15220 () | 374556..374666 | - | 111 | WP_086017781.1 | DUF3265 domain-containing protein | - |
| HPY15_RS15225 () | 375187..375465 | + | 279 | WP_001258569.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| HPY15_RS15230 () | 375458..375727 | + | 270 | WP_000277238.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| HPY15_RS15235 () | 376323..376748 | - | 426 | WP_052724878.1 | hypothetical protein | - |
| HPY15_RS15240 () | 376895..377593 | - | 699 | WP_046126203.1 | HAD family phosphatase | - |
| HPY15_RS15245 () | 377684..378241 | - | 558 | WP_046126204.1 | GNAT family N-acetyltransferase | - |
| HPY15_RS15250 () | 378238..378336 | - | 99 | WP_142741450.1 | acetyltransferase | - |
| HPY15_RS15255 () | 378453..378701 | + | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY15_RS15260 () | 378691..378981 | + | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY15_RS15265 () | 378999..379109 | - | 111 | WP_082798255.1 | DUF3265 domain-containing protein | - |
| HPY15_RS15270 () | 379106..379423 | - | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| HPY15_RS15275 () | 379434..379721 | - | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY15_RS15280 () | 380073..380281 | - | 209 | Protein_374 | DUF3709 domain-containing protein | - |
| HPY15_RS15285 () | 380578..381210 | - | 633 | WP_175235993.1 | hypothetical protein | - |
| HPY15_RS15290 () | 381464..381745 | - | 282 | WP_080341684.1 | DUF1289 domain-containing protein | - |
| HPY15_RS15295 () | 381694..381807 | - | 114 | WP_080341690.1 | acetyltransferase | - |
| HPY15_RS15300 () | 381863..382243 | - | 381 | WP_046126206.1 | glyoxalase | - |
| HPY15_RS15305 () | 382712..383632 | - | 921 | WP_001896359.1 | IS5-like element ISVch8 family transposase | - |
| HPY15_RS15310 () | 383936..384940 | + | 1005 | WP_000964932.1 | LD-carboxypeptidase | - |
| HPY15_RS15315 () | 385095..385460 | + | 366 | WP_046121679.1 | DUF3465 domain-containing protein | - |
| HPY15_RS15320 () | 385676..386008 | + | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY15_RS15325 () | 385995..386309 | + | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| HPY15_RS15330 () | 386603..386730 | + | 128 | Protein_384 | DUF645 family protein | - |
| HPY15_RS15335 () | 386746..386784 | + | 39 | WP_108244118.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|