MGE detailed information
MGE type: Genomic_island MGE length: 23172 bp
Accession: NZ_CP050244 Location: 3300539..3323710 Organism: Erwinia amylovora strain TS3238 Replicon: chromosome
Accession: NZ_CP050244 Location: 3300539..3323710 Organism: Erwinia amylovora strain TS3238 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHX00_RS14895 () | 3296258..3299623 | + | 3366 | WP_004155194.1 | ATP-binding protein | - |
| EHX00_RS14900 () | 3299772..3299924 | - | 153 | WP_004163933.1 | hypothetical protein | - |
| EHX00_RS14905 () | 3299920..3300120 | - | 201 | Protein_2870 | transposase | - |
| EHX00_RS14910 () | 3300539..3300814 | - | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EHX00_RS14915 () | 3300818..3301066 | - | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EHX00_RS14920 () | 3301163..3301996 | - | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| EHX00_RS14925 () | 3302109..3302429 | - | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| EHX00_RS14930 () | 3302466..3302789 | - | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EHX00_RS14935 () | 3302802..3303272 | - | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| EHX00_RS14940 () | 3303343..3303917 | - | 575 | Protein_2877 | DUF932 domain-containing protein | - |
| EHX00_RS14945 () | 3304142..3304384 | - | 243 | WP_004155184.1 | hypothetical protein | - |
| EHX00_RS14950 () | 3305594..3305791 | + | 198 | WP_004155182.1 | AlpA family phage regulatory protein | - |
| EHX00_RS14955 () | 3305899..3306493 | + | 595 | Protein_2880 | hypothetical protein | - |
| EHX00_RS14960 () | 3306693..3307778 | + | 1086 | WP_004155179.1 | DNA sulfur modification protein DndB | - |
| EHX00_RS14965 () | 3307775..3309409 | + | 1635 | WP_004155178.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| EHX00_RS14970 () | 3309399..3311399 | + | 2001 | WP_004155177.1 | DNA sulfur modification protein DndD | - |
| EHX00_RS14975 () | 3311399..3311752 | + | 354 | WP_009349902.1 | DNA sulfur modification protein DndE | - |
| EHX00_RS14980 () | 3311757..3313139 | + | 1383 | WP_169799831.1 | methyltransferase domain-containing protein | - |
| EHX00_RS14985 () | 3313344..3314165 | - | 822 | WP_004155174.1 | restriction endonuclease | - |
| EHX00_RS14990 () | 3314162..3319243 | - | 5082 | WP_004155173.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| EHX00_RS14995 () | 3319224..3320546 | - | 1323 | WP_004155172.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| EHX00_RS15000 () | 3320551..3322197 | - | 1647 | WP_004155171.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| EHX00_RS15005 () | 3322433..3323710 | - | 1278 | WP_004155169.1 | Prophage integrase IntA ; Integrase | Integrase |
| EHX00_RS15015 () | 3324331..3324840 | + | 510 | WP_004155168.1 | DUF2501 domain-containing protein | - |
| EHX00_RS15020 () | 3325011..3326510 | + | 1500 | WP_004155166.1 | DUF853 domain-containing protein | - |
| EHX00_RS15025 () | 3326512..3327789 | + | 1278 | WP_004155165.1 | DUF445 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA10128, TA294492 | NZ_NQJO01000001 | 3404618..3427747 | 0 |