MGE detailed information
MGE type: Conjugative plasmid MGE length: 108688 bp
Accession: NZ_CP045714 Location: 1..108688 Organism: Escherichia coli strain FHI_NMBU_11 Replicon: plasmid pFHI_NMBU_11_02
Accession: NZ_CP045714 Location: 1..108688 Organism: Escherichia coli strain FHI_NMBU_11 Replicon: plasmid pFHI_NMBU_11_02
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GHT02_RS26335 () | 1..858 | + | 858 | WP_001562860.1 | incFII family plasmid replication initiator RepA | - |
| GHT02_RS26340 () | 1795..2124 | + | 330 | WP_000493283.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GHT02_RS26345 () | 2105..2386 | + | 282 | WP_000780223.1 | helix-turn-helix transcriptional regulator | - |
| GHT02_RS26350 () | 2569..2853 | + | 285 | WP_024166087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| GHT02_RS26355 () | 2853..3128 | + | 276 | WP_000421250.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GHT02_RS26360 () | 3320..3802 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| GHT02_RS26365 () | 3919..4767 | - | 849 | WP_001058009.1 | 3'-5' exonuclease | - |
| GHT02_RS26370 () | 4813..5094 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GHT02_RS26375 () | 5091..5360 | - | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| GHT02_RS26380 () | 5521..5760 | + | 240 | WP_167549086.1 | hypothetical protein | - |
| GHT02_RS26385 () | 5993..6355 | + | 363 | Protein_11 | 3'-5' exonuclease | - |
| GHT02_RS26390 () | 6356..6714 | + | 359 | Protein_12 | ISKra4 family transposase | - |
| GHT02_RS26395 () | 6996..8135 | + | 1140 | WP_001033384.1 | helix-turn-helix domain-containing protein | - |
| GHT02_RS26400 () | 8255..9523 | + | 1269 | WP_000253684.1 | GntP family permease | - |
| GHT02_RS26405 () | 9531..10676 | + | 1146 | WP_000706385.1 | glycerate kinase | - |
| GHT02_RS26410 () | 11108..11290 | + | 183 | WP_001371150.1 | hypothetical protein | - |
| GHT02_RS26415 () | 11361..12584 | - | 1224 | WP_033802100.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| GHT02_RS26420 () | 12581..13699 | - | 1119 | WP_000164329.1 | MFS transporter | - |
| GHT02_RS26425 () | 14097..14519 | - | 423 | WP_001255659.1 | Exc2 family lipoprotein | - |
| GHT02_RS26430 () | 14640..14918 | + | 279 | WP_203048427.1 | hypothetical protein | - |
| GHT02_RS26435 () | 14910..15200 | - | 291 | WP_000047032.1 | hypothetical protein | - |
| GHT02_RS26440 () | 15440..16936 | + | 1497 | WP_001040753.1 | hypothetical protein | - |
| GHT02_RS26445 () | 16959..17492 | - | 534 | WP_086218982.1 | colicin immunity protein Cui | - |
| GHT02_RS26450 () | 17544..17834 | - | 291 | WP_001367320.1 | colicin K immunity protein | - |
| GHT02_RS26455 () | 17864..17941 | + | 78 | WP_106904597.1 | colicin release lysis protein | - |
| GHT02_RS26460 () | 18272..18583 | - | 312 | Protein_26 | Tn3 family transposase | - |
| GHT02_RS26465 () | 18649..18873 | + | 225 | WP_000493532.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GHT02_RS26470 () | 18870..19256 | + | 387 | WP_000673981.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| GHT02_RS26475 () | 19619..20260 | + | 642 | WP_001473476.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GHT02_RS26480 () | 20793..21218 | - | 426 | WP_001563264.1 | nucleoside triphosphatase NudI | - |
| GHT02_RS26485 () | 21220..21927 | - | 708 | WP_001563265.1 | deoxynucleoside kinase | - |
| GHT02_RS26490 () | 21924..22790 | - | 867 | WP_064562334.1 | radical SAM protein | - |
| GHT02_RS26495 () | 23275..23526 | + | 252 | WP_001563268.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GHT02_RS26500 () | 23523..23810 | + | 288 | WP_001563269.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GHT02_RS26505 () | 23978..24382 | + | 405 | WP_001563270.1 | DUF2251 domain-containing protein | - |
| GHT02_RS26510 () | 24691..26175 | + | 1485 | WP_001563271.1 | alpha/beta hydrolase | - |
| GHT02_RS26515 () | 26396..27004 | - | 609 | WP_044783647.1 | proQ/FINO family protein | - |
| GHT02_RS26520 () | 27282..27643 | + | 362 | Protein_38 | hypothetical protein | - |
| GHT02_RS26525 () | 27612..27815 | - | 204 | WP_171973489.1 | hypothetical protein | - |
| GHT02_RS26530 () | 27830..29590 | - | 1761 | WP_064562335.1 | bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase | - |
| GHT02_RS26535 () | 29583..30224 | - | 642 | WP_001563278.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| GHT02_RS26540 () | 30228..31145 | - | 918 | WP_077221290.1 | Phosphatidate cytidylyltransferase | VF |
| GHT02_RS26545 () | 31142..31746 | - | 605 | Protein_43 | CDP-alcohol phosphatidyltransferase family protein | - |
| GHT02_RS26550 () | 31803..31965 | - | 163 | Protein_44 | PAAR domain-containing protein | - |
| GHT02_RS26555 () | 32230..33096 | - | 867 | WP_044783644.1 | DMT family transporter | - |
| GHT02_RS26560 () | 33089..33271 | - | 183 | WP_139343127.1 | hypothetical protein | - |
| GHT02_RS26565 () | 33311..33511 | - | 201 | WP_000762569.1 | hypothetical protein | - |
| GHT02_RS26570 () | 33630..33977 | + | 348 | WP_077221289.1 | hypothetical protein | - |
| GHT02_RS26575 () | 33995..34585 | - | 591 | WP_077221288.1 | hypothetical protein | - |
| GHT02_RS26580 () | 34585..34842 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| GHT02_RS26585 () | 35439..35852 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| GHT02_RS26590 () | 35854..36636 | + | 783 | WP_033800729.1 | site-specific integrase | - |
| GHT02_RS26595 () | 36806..37159 | + | 354 | WP_033885663.1 | colicin M immunity protein | - |
| GHT02_RS26600 () | 37209..38024 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| GHT02_RS26605 () | 38044..38916 | + | 873 | Protein_55 | Catalase-peroxidase | VF |
| GHT02_RS26610 () | 38996..39349 | + | 354 | WP_171973488.1 | cytochrome b562 family protein | - |
| GHT02_RS26615 () | 39463..40230 | + | 768 | Protein_57 | IS3 family transposase | - |
| GHT02_RS26620 () | 40393..40629 | + | 237 | WP_032257624.1 | colicin V immunity protein | - |
| GHT02_RS26625 () | 40607..40918 | + | 312 | WP_086218983.1 | colicin V | - |
| GHT02_RS26630 () | 41088..43202 | - | 2115 | WP_109996808.1 | peptidase domain-containing ABC transporter | - |
| GHT02_RS26635 () | 43177..44451 | - | 1275 | WP_171973487.1 | HlyD family secretion protein | - |
| GHT02_RS26640 () | 44999..45103 | + | 105 | Protein_62 | CPBP family intramembrane metalloprotease | - |
| GHT02_RS26645 () | 45196..45453 | + | 258 | WP_000557618.1 | type II toxin-antitoxin system antitoxin PemI | - |
| GHT02_RS26650 () | 45386..45787 | + | 402 | WP_148722836.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| GHT02_RS26655 () | 45903..46298 | - | 396 | WP_000445939.1 | plasmid partitioning/stability family protein | - |
| GHT02_RS26660 () | 46298..47257 | - | 960 | WP_077221284.1 | plasmid segregation protein ParM | - |
| GHT02_RS26665 () | 47696..48598 | + | 903 | WP_077221296.1 | DUF1281 domain-containing protein | - |
| GHT02_RS26670 () | 48595..48906 | + | 312 | WP_032209723.1 | hypothetical protein | - |
| GHT02_RS26675 () | 48982..49665 | + | 684 | WP_062895754.1 | DNA methylase | - |
| GHT02_RS26680 () | 49666..49887 | + | 222 | WP_077221283.1 | hypothetical protein | - |
| GHT02_RS26685 () | 49901..50335 | + | 435 | WP_044809116.1 | DUF1380 family protein | - |
| GHT02_RS26690 () | 50380..51150 | + | 771 | WP_077221282.1 | hypothetical protein | - |
| GHT02_RS26695 () | 51690..51992 | + | 303 | WP_072148062.1 | antirestriction protein | - |
| GHT02_RS26700 () | 52039..52458 | + | 420 | WP_000271712.1 | DUF1380 family protein | - |
| GHT02_RS26705 () | 52458..52649 | + | 192 | WP_001027514.1 | hypothetical protein | - |
| GHT02_RS26710 () | 52646..52819 | + | 174 | WP_001308036.1 | hypothetical protein | - |
| GHT02_RS26715 () | 53689..53919 | + | 231 | WP_000218649.1 | hypothetical protein | - |
| GHT02_RS26720 () | 53971..55332 | + | 1362 | WP_077221281.1 | DUF3560 domain-containing protein | - |
| GHT02_RS26725 () | 55379..55942 | + | 564 | WP_077221280.1 | class I SAM-dependent methyltransferase | - |
| GHT02_RS26730 () | 56094..56348 | + | 255 | WP_072254791.1 | hypothetical protein | - |
| GHT02_RS26735 () | 56821..57342 | + | 522 | WP_077221344.1 | single-stranded DNA-binding protein | - |
| GHT02_RS26740 () | 57399..57632 | + | 234 | WP_000005975.1 | DUF905 domain-containing protein | - |
| GHT02_RS26745 () | 57693..59657 | + | 1965 | WP_077221343.1 | ParB/RepB/Spo0J family partition protein | - |
| GHT02_RS26750 () | 59726..60160 | + | 435 | WP_000845923.1 | conjugation system SOS inhibitor PsiB | - |
| GHT02_RS26755 () | 60157..60876 | + | 720 | WP_077221342.1 | plasmid SOS inhibition protein A | - |
| GHT02_RS26760 () | 60873..61187 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 61144..61349 | + | 206 | NuclAT_0 | - | Antitoxin Detail |
| - () | 61144..61349 | + | 206 | NuclAT_0 | - | Antitoxin Detail |
| - () | 61144..61349 | + | 206 | NuclAT_0 | - | Antitoxin Detail |
| - () | 61144..61349 | + | 206 | NuclAT_0 | - | Antitoxin Detail |
| GHT02_RS26765 () | 61395..61556 | + | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| GHT02_RS26770 () | 61649..61846 | + | 198 | Protein_88 | hypothetical protein | - |
| GHT02_RS26775 () | 62516..62818 | + | 303 | WP_024213649.1 | hypothetical protein | - |
| GHT02_RS26780 () | 62974..63261 | + | 288 | WP_000107543.1 | hypothetical protein | - |
| GHT02_RS26785 () | 63380..64201 | + | 822 | WP_001562881.1 | DUF945 domain-containing protein | - |
| GHT02_RS26790 () | 64498..65100 | - | 603 | WP_077221319.1 | hypothetical protein | VF |
| GHT02_RS26795 () | 65421..65804 | + | 384 | WP_001151535.1 | relaxosome protein TraM | - |
| GHT02_RS26800 () | 65998..66645 | + | 648 | WP_044783688.1 | transcriptional regulator TraJ family protein | - |
| GHT02_RS26805 () | 66764..66991 | + | 228 | WP_000589554.1 | conjugal transfer relaxosome protein TraY | - |
| GHT02_RS26810 () | 67026..67379 | + | 354 | WP_044192568.1 | type IV conjugative transfer system pilin TraA | - |
| GHT02_RS26815 () | 67394..67705 | + | 312 | WP_021573901.1 | type IV conjugative transfer system protein TraL | - |
| GHT02_RS26820 () | 67727..68293 | + | 567 | WP_000399759.1 | type IV conjugative transfer system protein TraE | - |
| GHT02_RS26825 () | 68280..69008 | + | 729 | WP_044192572.1 | type-F conjugative transfer system secretin TraK | - |
| GHT02_RS26830 () | 69008..70438 | + | 1431 | WP_077221320.1 | conjugal transfer protein TraB | - |
| GHT02_RS26835 () | 70428..71012 | + | 585 | WP_044192576.1 | conjugal transfer protein TraP | - |
| GHT02_RS26840 () | 70951..71193 | + | 243 | WP_071852359.1 | conjugal transfer protein TrbD | - |
| GHT02_RS26845 () | 71205..71456 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| GHT02_RS26850 () | 71453..71968 | + | 516 | WP_044192580.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GHT02_RS26855 () | 72103..72324 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| GHT02_RS26860 () | 72317..72790 | + | 474 | WP_044192582.1 | hypothetical protein | - |
| GHT02_RS26865 () | 72870..73088 | + | 219 | WP_044192584.1 | hypothetical protein | - |
| GHT02_RS26870 () | 73116..73463 | + | 348 | WP_044192586.1 | hypothetical protein | - |
| GHT02_RS26875 () | 73594..76224 | + | 2631 | WP_000069780.1 | type IV secretion system protein TraC | - |
| GHT02_RS26880 () | 76221..76607 | + | 387 | WP_000214101.1 | type-F conjugative transfer system protein TrbI | - |
| GHT02_RS26885 () | 76604..77236 | + | 633 | WP_001203739.1 | type-F conjugative transfer system protein TraW | - |
| GHT02_RS26890 () | 77233..78225 | + | 993 | WP_000817328.1 | conjugal transfer pilus assembly protein TraU | - |
| GHT02_RS26895 () | 78239..78781 | + | 543 | WP_001365589.1 | hypothetical protein | - |
| GHT02_RS26900 () | 79579..79956 | + | 378 | WP_001365598.1 | hypothetical protein | - |
| GHT02_RS26905 () | 80012..80137 | + | 126 | Protein_115 | TraU family protein | - |
| GHT02_RS26910 () | 80164..80496 | + | 333 | WP_044192456.1 | hypothetical protein | - |
| GHT02_RS26915 () | 80725..81363 | + | 639 | WP_044192458.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| GHT02_RS26920 () | 81360..81740 | + | 381 | WP_044192461.1 | hypothetical protein | - |
| GHT02_RS26925 () | 81900..83738 | + | 1839 | WP_086219011.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| GHT02_RS26930 () | 83752..84009 | + | 258 | WP_000864354.1 | conjugal transfer protein TrbE | - |
| GHT02_RS26935 () | 84002..84745 | + | 744 | WP_021573911.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| GHT02_RS26940 () | 84759..85100 | + | 342 | WP_072010638.1 | conjugal transfer protein TrbA | - |
| GHT02_RS26945 () | 85498..85788 | + | 291 | WP_032206677.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| GHT02_RS26950 () | 85775..86320 | + | 546 | WP_044192590.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| GHT02_RS26955 () | 86310..86596 | + | 287 | Protein_125 | P-type conjugative transfer protein TrbJ | - |
| GHT02_RS26960 () | 86544..86969 | + | 426 | WP_072010639.1 | F-type conjugal transfer protein TrbF | - |
| GHT02_RS26965 () | 86956..88329 | + | 1374 | WP_044192478.1 | conjugal transfer protein TraH | - |
| GHT02_RS26970 () | 88326..91169 | + | 2844 | WP_044192480.1 | conjugal transfer mating pair stabilization protein TraG | - |
| GHT02_RS26975 () | 91185..91688 | + | 504 | WP_077221295.1 | surface exclusion protein | - |
| GHT02_RS26980 () | 91720..92451 | + | 732 | WP_000850432.1 | complement resistance protein TraT | - |
| GHT02_RS26985 () | 92511..92771 | + | 261 | WP_001077900.1 | hypothetical protein | - |
| GHT02_RS26990 () | 92939..93670 | + | 732 | WP_044192484.1 | hypothetical protein | - |
| GHT02_RS26995 () | 93726..95933 | + | 2208 | WP_203048425.1 | type IV conjugative transfer system coupling protein TraD | - |
| GHT02_RS27000 () | 95933..101203 | + | 5271 | WP_077221293.1 | Multifunctional conjugation protein TraI | Relaxase |
| GHT02_RS27005 () | 101223..101969 | + | 747 | WP_044783666.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| GHT02_RS27010 () | 102051..102419 | + | 369 | WP_044783665.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| GHT02_RS27015 () | 102455..103012 | + | 558 | WP_044783663.1 | fertility inhibition protein FinO | - |
| GHT02_RS27020 () | 103166..103369 | + | 204 | WP_077221291.1 | hypothetical protein | - |
| GHT02_RS27025 () | 104060..106054 | + | 1995 | WP_044783662.1 | Colicin I receptor | VF |
| GHT02_RS27030 () | 106477..106938 | + | 462 | Protein_140 | thermonuclease family protein | - |
| GHT02_RS27035 () | 107041..107424 | + | 384 | WP_001109065.1 | hypothetical protein | - |
| - () | 107599..107655 | - | 57 | NuclAT_1 | - | - |
| - () | 107599..107655 | - | 57 | NuclAT_1 | - | - |
| - () | 107599..107655 | - | 57 | NuclAT_1 | - | - |
| - () | 107599..107655 | - | 57 | NuclAT_1 | - | - |
| GHT02_RS27040 () | 107647..107853 | + | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | - |
| GHT02_RS27045 () | 108137..108397 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|