NZ_CP0435561065827..1066264

MGE detailed information

MGE type: IS/Tn        MGE length: 438 bp
Accession: NZ_CP043556        Location: 1065827..1066264         Organism: Vibrio cholerae strain RFB16       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
F0316_RS19435 () 1061321..1061809 + 489 WP_149560854.1 hypothetical protein -
F0316_RS19440 () 1061928..1062209 + 282 WP_080368113.1 DUF1289 domain-containing protein -
F0316_RS19455 () 1062408..1062594 + 187 Protein_989 DUF3709 domain-containing protein -
F0316_RS19460 () 1062591..1062824 + 234 WP_148520751.1 DUF3709 domain-containing protein -
F0316_RS19470 () 1063089..1063406 - 318 WP_172626091.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
F0316_RS19475 () 1063425..1063667 - 243 WP_000557291.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
F0316_RS19480 () 1063911..1064258 + 348 WP_000933409.1 hypothetical protein -
F0316_RS19485 () 1064547..1065671 + 1125 WP_095474076.1 right-handed parallel beta-helix repeat-containing protein -
F0316_RS19490 () 1065827..1066264 + 438 WP_000503164.1 IS200-IS605 family transposase IS1004 Transposase
F0316_RS19495 () 1066548..1067030 + 483 WP_149560857.1 GNAT family N-acetyltransferase -
F0316_RS19500 () 1067171..1067557 + 387 WP_001015087.1 MmcQ/YjbR family DNA-binding protein -
F0316_RS19505 () 1067694..1067816 - 123 Protein_998 type II toxin-antitoxin system YafQ family toxin -
F0316_RS19515 () 1068959..1069375 + 417 WP_000759006.1 DUF1311 domain-containing protein -
F0316_RS19520 () 1069530..1070306 + 777 WP_149560858.1 choline kinase -
F0316_RS19525 () 1070391..1070909 + 519 WP_149560882.1 hypothetical protein -
F0316_RS19530 () 1070900..1071022 + 123 WP_080368119.1 DUF3265 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Vibrio cholerae O1 biovar El Tor str. N16961 IS/Tn TA179, TA177, TA178, TA10035 NC_002506 428335..428772 0.005