NZ_CP0432052227930..2253672

MGE detailed information

MGE type: Prophage        MGE length: 25743 bp
Accession: NZ_CP043205        Location: 2227930..2253672         Organism: Escherichia coli O16:H48 strain PG20180054       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FYA08_RS10725 () 2224179..2226605 - 2427 WP_000041675.1 dimethyl sulfoxide reductase subunit A -
FYA08_RS10730 () 2226804..2227109 - 306 WP_001300836.1 DUF1161 domain-containing protein -
FYA08_RS10735 () 2227217..2227927 + 711 WP_001321287.1 YnfC family lipoprotein -
FYA08_RS10740 () 2227930..2228490 - 561 WP_001138581.1 spermidine N1-acetyltransferase -
FYA08_RS10745 () 2228525..2228866 - 342 WP_000705211.1 DUF1283 family protein -
FYA08_RS10750 () 2229001..2229327 + 327 WP_000598292.1 YnfA family protein -
FYA08_RS10755 () 2229533..2230747 + 1215 WP_001295394.1 starvation-sensing protein RspA -
FYA08_RS10760 () 2230759..2231778 + 1020 WP_000836066.1 Zn-dependent oxidoreductase -
FYA08_RS10770 () 2231966..2233123 - 1158 Protein_2097 Thioredoxin/glutathione peroxidase BtuE ; Integrase Integrase
FYA08_RS10775 () 2233137..2233832 - 696 Protein_2098 IS3 family transposase IS2 Transposase
FYA08_RS10780 () 2233829..2234596 - 768 Protein_2099 exonuclease -
FYA08_RS10785 () 2234689..2234880 - 192 WP_001083297.1 lysis protein YdfD -
FYA08_RS10790 () 2234877..2235065 - 189 WP_000854559.1 cell division inhibition protein DicB -
FYA08_RS10800 () 2235633..2235851 - 219 WP_001171942.1 hypothetical protein -
FYA08_RS10805 () 2236011..2236166 - 156 WP_000379575.1 DUF1391 family protein -
FYA08_RS10810 () 2236333..2236740 - 408 WP_000448564.1 DNA-binding transcriptional dual regulator DicA -
FYA08_RS10815 () 2236824..2237054 + 231 WP_000920568.1 dicB transcriptional regulator DicC -
FYA08_RS10820 () 2237038..2237316 + 279 Protein_2106 hypothetical protein -
FYA08_RS10825 () 2237351..2237500 + 150 WP_011443592.1 hypothetical protein -
FYA08_RS10830 () 2237937..2238269 - 333 WP_001301033.1 protein FlxA -
FYA08_RS10835 () 2238472..2238777 - 306 WP_001326990.1 hypothetical protein -
FYA08_RS10840 () 2238802..2239041 + 240 WP_000534858.1 type II toxin-antitoxin system antitoxin RelB Antitoxin Detail
FYA08_RS10845 () 2239041..2239328 + 288 WP_000323025.1 type II toxin-antitoxin system mRNA interferase RelE Toxin Detail
FYA08_RS10850 () 2239400..2239555 + 156 WP_000813254.1 type I toxin-antitoxin system toxin HokD -
FYA08_RS10855 () 2239772..2240023 + 252 WP_000980994.1 hypothetical protein -
FYA08_RS10860 () 2240090..2240368 + 279 WP_012304870.1 hypothetical protein -
FYA08_RS10865 () 2240370..2241419 + 1050 WP_001265198.1 DUF968 domain-containing protein -
FYA08_RS10870 () 2241433..2242185 + 753 WP_001047135.1 antitermination protein -
FYA08_RS10875 () 2242463..2242552 - 90 WP_120795389.1 hypothetical protein -
FYA08_RS10880 () 2242607..2242819 - 213 WP_000087756.1 cold shock-like protein CspF -
FYA08_RS10885 () 2243120..2243335 + 216 WP_000066484.1 cold shock-like protein CspB -
FYA08_RS23160 () 2243699..2243869 - 171 WP_211180497.1 putative zinc-binding protein YnfU -
FYA08_RS10890 () 2244089..2244304 + 216 WP_000839590.1 phage lysis protein EssD -
FYA08_RS10895 () 2244309..2244620 + 312 WP_000189916.1 YdfR family protein -
FYA08_RS10900 () 2244617..2245150 + 534 WP_001092971.1 lysozyme -
FYA08_RS10905 () 2245147..2245644 + 498 WP_001071769.1 DUF2514 domain-containing protein -
FYA08_RS10910 () 2246007..2246219 + 213 WP_000066495.1 cold shock protein CspI -
FYA08_RS10915 () 2246230..2246418 + 189 WP_071524604.1 cold-shock protein -
FYA08_RS10920 () 2246421..2246486 + 66 WP_120795388.1 hypothetical protein -
FYA08_RS10925 () 2246565..2246720 + 156 WP_001309517.1 hypothetical protein -
FYA08_RS10930 () 2246892..2247065 + 174 WP_001019606.1 addiction module toxin, GnsA/GnsB family -
FYA08_RS10935 () 2247217..2247627 - 411 WP_000373090.1 DUF1398 domain-containing protein -
FYA08_RS10940 () 2247685..2247918 - 234 WP_001368374.1 YlcI/YnfO family protein -
FYA08_RS10945 () 2248307..2248876 + 570 WP_064673984.1 DNA-packaging protein -
FYA08_RS10950 () 2248827..2249789 + 963 WP_001027733.1 phage tail protein -
FYA08_RS10955 () 2249789..2250364 + 576 WP_000885611.1 tail fiber assembly protein -
FYA08_RS10960 () 2250462..2251052 - 591 WP_000086527.1 Tn3 family transposase TnpR_ISSba14 Transposase
FYA08_RS10965 () 2251369..2251602 - 234 WP_000836770.1 cold shock protein YdfK -
FYA08_RS10970 () 2251671..2251784 - 114 WP_120795384.1 hypothetical protein -
FYA08_RS10975 () 2252305..2253672 + 1368 Protein_2138 MHS family MFS transporter -
FYA08_RS10980 () 2253761..2255221 + 1461 WP_000527743.1 mannitol dehydrogenase family protein -
FYA08_RS10985 () 2255256..2255459 - 204 WP_000214712.1 putative selenium delivery protein YdfZ -
FYA08_RS10990 () 2255636..2256322 - 687 WP_000215549.1 DNA-binding transcriptional regulator YdfH -
FYA08_RS10995 () 2256411..2257157 - 747 WP_000636571.1 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Prophage TA20026 CP009789 1611431..1634475 0.006
Escherichia coli str. K-12 substr. MC4100 Prophage TA20067 HG738867 1519531..1552992 0.008
Escherichia coli str. K-12 substr. MG1655 Prophage TA1041 NC_000913 1631002..1664463 0.008
Escherichia coli str. K-12 substr. W3110 Prophage TA21438 NC_007779 1632716..1654422 0.005
Escherichia coli str. K-12 substr. DH10B Prophage TA22686 NC_010473 1718651..1753448 0.008
Escherichia coli BW2952 Prophage TA23854 NC_012759 1521085..1554546 0.008
Escherichia coli DH1 Prophage TA27404 NC_017638 1615804..1634890 0.008
Escherichia coli BW25113 Prophage TA48683 NZ_CP009273 1625259..1658720 0.008
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Prophage TA68425 NZ_CP017979 1534772..1559021 0.004
Escherichia coli strain DH5alpha Prophage TA90479 NZ_CP025520 488442..510148 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Prophage TA285017 NZ_HG738867 1519531..1552992 0.008