MGE detailed information
MGE type: Prophage MGE length: 33462 bp
Accession: NZ_CP042845 Location: 2335378..2368839 Organism: Escherichia coli strain JME65 Replicon: chromosome
Accession: NZ_CP042845 Location: 2335378..2368839 Organism: Escherichia coli strain JME65 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FVE21_RS11300 () | 2331893..2332639 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| FVE21_RS11305 () | 2332728..2333414 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| FVE21_RS11310 () | 2333591..2333794 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| FVE21_RS11315 () | 2333829..2335289 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| FVE21_RS11320 () | 2335378..2336745 | - | 1368 | Protein_2173 | MHS family MFS transporter | - |
| FVE21_RS11325 () | 2337266..2337379 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| FVE21_RS11330 () | 2337448..2337681 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| FVE21_RS11335 () | 2337998..2338588 | + | 591 | WP_000078177.1 | recombinase family protein | - |
| FVE21_RS11340 () | 2338686..2339261 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| FVE21_RS11345 () | 2339261..2340223 | - | 963 | WP_001027733.1 | phage tail protein | - |
| FVE21_RS11350 () | 2340174..2340743 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| FVE21_RS11355 () | 2341132..2341365 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| FVE21_RS11360 () | 2341423..2341833 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| FVE21_RS11365 () | 2341985..2342158 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| FVE21_RS11370 () | 2342330..2342485 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| FVE21_RS11375 () | 2342564..2342629 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| FVE21_RS11380 () | 2342632..2342820 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| FVE21_RS11385 () | 2342831..2343043 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| FVE21_RS11390 () | 2343406..2343903 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| FVE21_RS11395 () | 2343900..2344433 | - | 534 | WP_001092971.1 | lysozyme | - |
| FVE21_RS11400 () | 2344430..2344741 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| FVE21_RS11405 () | 2344746..2344961 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| FVE21_RS11410 () | 2345715..2345930 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| FVE21_RS11415 () | 2346231..2346443 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| FVE21_RS11420 () | 2346498..2346587 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| FVE21_RS11425 () | 2346865..2347617 | - | 753 | WP_001047135.1 | antitermination protein | - |
| FVE21_RS11430 () | 2347631..2348680 | - | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| FVE21_RS11435 () | 2348682..2348960 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| FVE21_RS11440 () | 2349027..2349278 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| FVE21_RS11445 () | 2349495..2349650 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FVE21_RS11450 () | 2349722..2350009 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FVE21_RS11455 () | 2350009..2350248 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FVE21_RS11460 () | 2350273..2350578 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| FVE21_RS11465 () | 2350781..2351113 | + | 333 | WP_001301033.1 | protein FlxA | - |
| FVE21_RS11470 () | 2351550..2351699 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| FVE21_RS11475 () | 2351734..2352012 | - | 279 | Protein_2204 | hypothetical protein | - |
| FVE21_RS11480 () | 2351996..2352226 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| FVE21_RS11485 () | 2352310..2352717 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| FVE21_RS11490 () | 2352884..2353039 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| FVE21_RS11495 () | 2353199..2353417 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| FVE21_RS11505 () | 2353985..2354173 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| FVE21_RS11510 () | 2354170..2354361 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| FVE21_RS11515 () | 2354454..2355221 | + | 768 | Protein_2211 | exonuclease | - |
| FVE21_RS11520 () | 2355218..2355913 | + | 696 | Protein_2212 | IS3-like element IS2 family transposase | - |
| FVE21_RS11525 () | 2355927..2357084 | + | 1158 | Protein_2213 | tyrosine-type recombinase/integrase | - |
| FVE21_RS11530 () | 2357104..2357214 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| FVE21_RS11535 () | 2357272..2358291 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| FVE21_RS11540 () | 2358303..2359517 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| FVE21_RS11545 () | 2359723..2360049 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| FVE21_RS11550 () | 2360184..2360525 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| FVE21_RS11555 () | 2360560..2361120 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| FVE21_RS11560 () | 2361123..2361833 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| FVE21_RS11565 () | 2361941..2362246 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| FVE21_RS11570 () | 2362445..2364871 | + | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| FVE21_RS11575 () | 2364932..2367355 | + | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| FVE21_RS11580 () | 2367366..2367983 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| FVE21_RS11585 () | 2367985..2368839 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| FVE21_RS11590 () | 2368882..2369496 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| FVE21_RS11595 () | 2369655..2370947 | + | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| FVE21_RS11600 () | 2370900..2371595 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| FVE21_RS11605 () | 2371720..2372940 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0 |