MGE detailed information
MGE type: Prophage MGE length: 33462 bp
Accession: NZ_CP040667 Location: 1751269..1784730 Organism: Escherichia coli strain S17-1 Replicon: chromosome
Accession: NZ_CP040667 Location: 1751269..1784730 Organism: Escherichia coli strain S17-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGH86_RS08400 () | 1747168..1748388 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| FGH86_RS08405 () | 1748513..1749208 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| FGH86_RS08410 () | 1749161..1750453 | - | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| FGH86_RS08415 () | 1750612..1751226 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| FGH86_RS08420 () | 1751269..1752123 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| FGH86_RS08425 () | 1752125..1752742 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| FGH86_RS08430 () | 1752753..1755176 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| FGH86_RS08435 () | 1755237..1757663 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| FGH86_RS08440 () | 1757862..1758167 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| FGH86_RS08445 () | 1758275..1758985 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| FGH86_RS08450 () | 1758988..1759548 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| FGH86_RS08455 () | 1759583..1759924 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| FGH86_RS08460 () | 1760059..1760385 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| FGH86_RS08465 () | 1760591..1761805 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| FGH86_RS08470 () | 1761817..1762836 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| FGH86_RS08475 () | 1762894..1763004 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| FGH86_RS08480 () | 1763024..1764181 | - | 1158 | Protein_1649 | tyrosine-type recombinase/integrase | - |
| FGH86_RS08485 () | 1764195..1764890 | - | 696 | Protein_1650 | IS3-like element IS2 family transposase | - |
| FGH86_RS08490 () | 1764887..1765654 | - | 768 | Protein_1651 | exonuclease | - |
| FGH86_RS08495 () | 1765747..1765938 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| FGH86_RS08500 () | 1765935..1766123 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| FGH86_RS08510 () | 1766691..1766909 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| FGH86_RS08515 () | 1767069..1767224 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| FGH86_RS08520 () | 1767391..1767798 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| FGH86_RS08525 () | 1767882..1768112 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| FGH86_RS08530 () | 1768096..1768374 | + | 279 | Protein_1658 | hypothetical protein | - |
| FGH86_RS08535 () | 1768409..1768558 | + | 150 | WP_011443592.1 | hypothetical protein | - |
| FGH86_RS08540 () | 1768995..1769327 | - | 333 | WP_001301033.1 | protein FlxA | - |
| FGH86_RS08545 () | 1769530..1769835 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| FGH86_RS08550 () | 1769860..1770099 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FGH86_RS08555 () | 1770099..1770386 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FGH86_RS08560 () | 1770458..1770613 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FGH86_RS08565 () | 1770830..1771081 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| FGH86_RS08570 () | 1771148..1771426 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| FGH86_RS08575 () | 1771428..1772477 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| FGH86_RS08580 () | 1772491..1773243 | + | 753 | WP_001047135.1 | antitermination protein | - |
| FGH86_RS08585 () | 1773521..1773610 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| FGH86_RS08590 () | 1773665..1773877 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| FGH86_RS08595 () | 1774178..1774393 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| FGH86_RS08600 () | 1775147..1775362 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| FGH86_RS08605 () | 1775367..1775678 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| FGH86_RS08610 () | 1775675..1776208 | + | 534 | WP_001092971.1 | lysozyme | - |
| FGH86_RS08615 () | 1776205..1776702 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| FGH86_RS08620 () | 1777065..1777277 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| FGH86_RS08625 () | 1777288..1777476 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| FGH86_RS08630 () | 1777479..1777544 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| FGH86_RS08635 () | 1777623..1777778 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| FGH86_RS08640 () | 1777950..1778123 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| FGH86_RS08645 () | 1778275..1778685 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| FGH86_RS08650 () | 1778743..1778976 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| FGH86_RS08655 () | 1779365..1779934 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| FGH86_RS08660 () | 1779885..1780847 | + | 963 | WP_001027733.1 | phage tail protein | - |
| FGH86_RS08665 () | 1780847..1781422 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| FGH86_RS08670 () | 1781520..1782110 | - | 591 | WP_000078177.1 | recombinase family protein | - |
| FGH86_RS08675 () | 1782427..1782660 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| FGH86_RS08680 () | 1782729..1782842 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| FGH86_RS08685 () | 1783363..1784730 | + | 1368 | Protein_1689 | MHS family MFS transporter | - |
| FGH86_RS08690 () | 1784819..1786279 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| FGH86_RS08695 () | 1786314..1786517 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| FGH86_RS08700 () | 1786694..1787380 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| FGH86_RS08705 () | 1787469..1788215 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0 |