MGE detailed information
MGE type: Conjugative plasmid MGE length: 157534 bp
Accession: NZ_CP037942 Location: 1..157534 Organism: Escherichia coli strain CFSAN027350 Replicon: plasmid pCFSAN027350
Accession: NZ_CP037942 Location: 1..157534 Organism: Escherichia coli strain CFSAN027350 Replicon: plasmid pCFSAN027350
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKI55_RS27750 () | 798..2336 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| EKI55_RS27755 () | 2386..2733 | - | 348 | WP_001583081.1 | IS66 family transposase ISEc8 | Transposase |
| EKI55_RS27760 () | 2730..3110 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| EKI55_RS27765 () | 3386..7285 | - | 3900 | WP_032345671.1 | Serine protease EspP | VF |
| EKI55_RS27770 () | 7665..8168 | - | 504 | WP_040116981.1 | thermonuclease family protein | - |
| EKI55_RS27775 () | 8328..8951 | + | 624 | WP_040116980.1 | hypothetical protein | - |
| EKI55_RS27790 () | 10166..10471 | - | 306 | Protein_8 | RNA polymerase subunit sigma-70 | - |
| EKI55_RS27795 () | 10745..11392 | - | 648 | WP_032345686.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| EKI55_RS27800 () | 11463..13628 | - | 2166 | WP_001597018.1 | DotA/TraY family protein | - |
| EKI55_RS27805 () | 13701..14270 | - | 570 | WP_001204060.1 | conjugal transfer protein TraX | - |
| EKI55_RS27810 () | 14267..15472 | - | 1206 | WP_032345688.1 | conjugal transfer protein TraW | - |
| EKI55_RS27815 () | 15433..16050 | - | 618 | WP_032345689.1 | hypothetical protein | - |
| EKI55_RS27820 () | 16050..18512 | - | 2463 | Protein_14 | ATP-binding protein | - |
| EKI55_RS27825 () | 18604..20142 | - | 1539 | WP_000099160.1 | IS66 family transposase ISEc22 | Transposase |
| EKI55_RS27830 () | 20191..20538 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| EKI55_RS27835 () | 20535..20939 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| EKI55_RS27845 () | 21177..22364 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| EKI55_RS27850 () | 22364..22729 | - | 366 | WP_032345630.1 | hypothetical protein | - |
| EKI55_RS27855 () | 22811..23413 | + | 603 | Protein_20 | IS3 family transposase IS2 | Transposase |
| EKI55_RS27860 () | 23634..24596 | - | 963 | WP_032345409.1 | ParB/RepB/Spo0J family partition protein | - |
| EKI55_RS27865 () | 24593..25798 | - | 1206 | WP_000817635.1 | Plasmid partition protein A | VF |
| EKI55_RS27875 () | 26514..26765 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| EKI55_RS27880 () | 26762..27049 | + | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EKI55_RS27885 () | 27048..27296 | + | 249 | Protein_25 | integrase core domain-containing protein | - |
| EKI55_RS27895 () | 27976..28694 | + | 719 | Protein_26 | RepB family plasmid replication initiator protein | - |
| EKI55_RS27900 () | 28778..29428 | + | 651 | WP_000993931.1 | IS66 family transposase IS679 | Transposase |
| EKI55_RS27905 () | 29428..29775 | + | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| EKI55_RS27910 () | 29795..31366 | + | 1572 | WP_000381416.1 | IS66 family transposase IS679 | Transposase |
| EKI55_RS27915 () | 31395..31664 | + | 270 | Protein_30 | protein RepA | - |
| EKI55_RS27920 () | 31814..33352 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| EKI55_RS27925 () | 33402..33749 | - | 348 | WP_001583081.1 | IS66 family transposase ISEc8 | Transposase |
| EKI55_RS27930 () | 33746..34126 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| EKI55_RS27935 () | 34417..34575 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 34619..34843 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 34619..34843 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 34619..34843 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 34619..34843 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| EKI55_RS28940 () | 34655..34843 | + | 189 | WP_001336239.1 | hypothetical protein | - |
| EKI55_RS27940 () | 34855..35574 | - | 720 | WP_032345718.1 | plasmid SOS inhibition protein A | - |
| EKI55_RS27945 () | 35571..36005 | - | 435 | WP_032345719.1 | conjugation system SOS inhibitor PsiB | - |
| EKI55_RS27950 () | 36060..37878 | - | 1819 | Protein_38 | ParB/RepB/Spo0J family partition protein | - |
| EKI55_RS27955 () | 37817..38143 | + | 327 | WP_032345720.1 | hypothetical protein | - |
| EKI55_RS27960 () | 38243..38443 | + | 201 | Protein_40 | IS3 family transposase IS1203 | Transposase |
| EKI55_RS27970 () | 39700..40137 | + | 438 | Protein_42 | IS3 family transposase ISSfl10 | Transposase |
| EKI55_RS27975 () | 40180..40380 | - | 201 | Protein_43 | IS3 family transposase IS1203 | Transposase |
| EKI55_RS27980 () | 40435..40629 | + | 195 | Protein_44 | IS21 family transposase IS21 | Transposase |
| EKI55_RS27985 () | 40697..40921 | - | 225 | Protein_45 | IS3 family transposase IS3H | Transposase |
| EKI55_RS27990 () | 40995..50504 | - | 9510 | WP_032345680.1 | Toxin B | VF |
| EKI55_RS27995 () | 50611..50763 | - | 153 | Protein_47 | IS1 family transposase | - |
| EKI55_RS28000 () | 50760..50880 | - | 121 | Protein_48 | IS21 family transposase ISEc62 | Transposase |
| EKI55_RS28005 () | 50920..51183 | - | 264 | Protein_49 | IS21 family transposase ISEc62 | Transposase |
| EKI55_RS28010 () | 51277..51626 | + | 350 | Protein_50 | IS3 family transposase IS3H | Transposase |
| EKI55_RS28020 () | 52157..53370 | + | 1214 | WP_165963876.1 | IS3 family transposase IS629 | Transposase |
| EKI55_RS28030 () | 53501..53938 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| EKI55_RS28035 () | 53963..54145 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| EKI55_RS28040 () | 54703..54885 | + | 183 | WP_001481829.1 | hypothetical protein | - |
| EKI55_RS28045 () | 54992..55258 | - | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| EKI55_RS28050 () | 55678..55956 | - | 279 | WP_000545937.1 | hypothetical protein | - |
| EKI55_RS28065 () | 56506..56757 | - | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| EKI55_RS28070 () | 56747..57007 | - | 261 | WP_000702245.1 | hypothetical protein | Toxin Detail |
| EKI55_RS28075 () | 57059..57283 | - | 225 | WP_000814381.1 | hypothetical protein | - |
| EKI55_RS28080 () | 57380..57589 | - | 210 | WP_000866036.1 | hypothetical protein | - |
| EKI55_RS28085 () | 57630..57953 | - | 324 | WP_000427403.1 | hypothetical protein | - |
| EKI55_RS28095 () | 58483..58857 | - | 375 | WP_021500037.1 | hypothetical protein | - |
| EKI55_RS29050 () | 58908..59198 | - | 291 | WP_170995147.1 | hypothetical protein | - |
| EKI55_RS28105 () | 59217..59582 | + | 366 | WP_032345630.1 | hypothetical protein | - |
| EKI55_RS28110 () | 59582..60769 | + | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| EKI55_RS28115 () | 60952..61630 | - | 679 | Protein_66 | IS3 family transposase IS2 | Transposase |
| EKI55_RS28120 () | 61977..62030 | + | 54 | WP_106879220.1 | helix-turn-helix domain-containing protein | - |
| EKI55_RS28125 () | 62112..62494 | + | 383 | Protein_68 | IS200-IS605 family transposase ISEc46 | Transposase |
| EKI55_RS28130 () | 62519..63548 | - | 1030 | Protein_69 | IS630 family transposase | - |
| EKI55_RS28135 () | 63650..63868 | + | 219 | Protein_70 | transposase | - |
| EKI55_RS29055 () | 64171..66375 | + | 2205 | Protein_71 | glycosyl transferase | - |
| EKI55_RS28145 () | 67369..73116 | + | 5748 | WP_180269607.1 | DUF3491 domain-containing protein | - |
| EKI55_RS28150 () | 73229..74442 | + | 1214 | WP_165963882.1 | IS3 family transposase IS629 | Transposase |
| EKI55_RS28165 () | 75898..76719 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| EKI55_RS28170 () | 76719..77825 | + | 1107 | WP_064764374.1 | glycosyltransferase family 4 protein | - |
| EKI55_RS28175 () | 77915..79636 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| EKI55_RS28180 () | 79710..80708 | + | 999 | WP_077850519.1 | Lipid A biosynthesis myristoyltransferase | VF |
| EKI55_RS28185 () | 80872..81228 | + | 357 | Protein_78 | IS66 family transposase ISEc8 | Transposase |
| EKI55_RS28190 () | 81250..81717 | - | 468 | Protein_79 | IS66 family transposase IS682 | Transposase |
| EKI55_RS28195 () | 81749..83320 | - | 1572 | WP_000381416.1 | IS66 family transposase IS679 | Transposase |
| EKI55_RS28200 () | 83340..83687 | - | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| EKI55_RS28205 () | 83687..84337 | - | 651 | WP_000993931.1 | IS66 family transposase IS679 | Transposase |
| EKI55_RS28210 () | 84424..85575 | - | 1152 | Protein_83 | IS66 family transposase ISEc23 | Transposase |
| EKI55_RS28215 () | 85606..85956 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| EKI55_RS28220 () | 85953..86327 | - | 375 | Protein_85 | IS66 family transposase ISEc23 | Transposase |
| EKI55_RS28225 () | 86378..87591 | + | 1214 | WP_165963876.1 | IS3 family transposase IS629 | Transposase |
| EKI55_RS28230 () | 87835..88182 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| EKI55_RS28235 () | 88355..89926 | - | 1572 | WP_106904239.1 | IS66 family transposase ISCro1 | Transposase |
| EKI55_RS28240 () | 89946..90293 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EKI55_RS28245 () | 90293..90970 | - | 678 | WP_100699708.1 | IS66 family transposase ISCro1 | Transposase |
| EKI55_RS28250 () | 91020..92477 | + | 1458 | Protein_91 | IS66 family transposase ISEc8 | Transposase |
| EKI55_RS28255 () | 92657..93507 | - | 851 | Protein_92 | IS3 family transposase IS1203 | Transposase |
| EKI55_RS28260 () | 93565..94065 | + | 501 | WP_072279305.1 | hypothetical protein | - |
| EKI55_RS28265 () | 94227..94643 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EKI55_RS28270 () | 94640..94870 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| EKI55_RS28280 () | 95431..95844 | + | 414 | WP_000465041.1 | hypothetical protein | - |
| EKI55_RS28285 () | 95846..96628 | + | 783 | WP_001164190.1 | site-specific integrase | - |
| EKI55_RS28290 () | 96800..97153 | + | 354 | WP_000864811.1 | colicin M immunity protein | - |
| EKI55_RS28295 () | 97203..97364 | - | 162 | Protein_99 | lipid II-degrading bacteriocin | - |
| EKI55_RS28300 () | 97394..97489 | - | 96 | Protein_100 | transcriptional regulator | - |
| EKI55_RS28305 () | 97556..98995 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| EKI55_RS28310 () | 98999..101119 | - | 2121 | WP_072164929.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| EKI55_RS28315 () | 101169..104165 | - | 2997 | WP_032345638.1 | Hemolysin, chromosomal | VF |
| EKI55_RS28320 () | 104167..104682 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| EKI55_RS28330 () | 105000..106013 | + | 1014 | Protein_105 | IS3 family transposase | - |
| EKI55_RS28335 () | 106383..106838 | - | 456 | WP_032345632.1 | DUF2569 family protein | - |
| EKI55_RS28340 () | 106926..107549 | - | 624 | WP_061301763.1 | hypothetical protein | - |
| EKI55_RS28345 () | 107708..108201 | + | 494 | Protein_108 | thermonuclease family protein | - |
| EKI55_RS28350 () | 108468..109214 | + | 747 | WP_032345398.1 | conjugal transfer pilus acetylase TraX | - |
| EKI55_RS28355 () | 109273..110133 | + | 861 | WP_032345399.1 | putative protein YcjY | VF |
| EKI55_RS28360 () | 110236..110796 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| EKI55_RS28365 () | 110927..111139 | + | 213 | WP_032345400.1 | hypothetical protein | - |
| EKI55_RS28375 () | 111383..111844 | + | 462 | WP_001233850.1 | thermonuclease family protein | - |
| EKI55_RS28380 () | 111890..112099 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| EKI55_RS28385 () | 112137..112727 | + | 591 | WP_000766812.1 | DUF2726 domain-containing protein | - |
| EKI55_RS28390 () | 112967..113221 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| EKI55_RS28400 () | 113457..113531 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| EKI55_RS28405 () | 113524..114381 | + | 858 | WP_032345402.1 | incFII family plasmid replication initiator RepA | - |
| EKI55_RS28420 () | 115294..115563 | + | 270 | WP_032209716.1 | hypothetical protein | Antitoxin Detail |
| EKI55_RS28425 () | 115560..115841 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EKI55_RS28435 () | 116355..117563 | - | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| EKI55_RS28440 () | 117544..117816 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| EKI55_RS28450 () | 118068..119276 | - | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| EKI55_RS28455 () | 119257..119529 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| EKI55_RS28470 () | 120104..120691 | + | 588 | WP_032345404.1 | serine acetyltransferase | - |
| EKI55_RS28475 () | 120845..120952 | - | 108 | WP_133374448.1 | transposase domain-containing protein | - |
| EKI55_RS28480 () | 121128..122315 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| EKI55_RS28485 () | 122315..122680 | - | 366 | WP_032345630.1 | hypothetical protein | - |
| EKI55_RS28490 () | 122956..124143 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| EKI55_RS28495 () | 124143..124508 | - | 366 | WP_032345630.1 | hypothetical protein | - |
| EKI55_RS28500 () | 124784..125971 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| EKI55_RS28505 () | 125971..126336 | - | 366 | WP_032345630.1 | hypothetical protein | - |
| EKI55_RS28510 () | 126425..126682 | - | 258 | Protein_133 | IS3 family transposase IS2 | Transposase |
| EKI55_RS28515 () | 126758..127534 | + | 777 | Protein_134 | hypothetical protein | - |
| EKI55_RS28950 () | 127700..127843 | + | 144 | WP_000270807.1 | DUF1281 domain-containing protein | - |
| EKI55_RS28955 () | 127850..128209 | + | 360 | WP_001336695.1 | DUF1281 domain-containing protein | - |
| EKI55_RS28535 () | 128280..128585 | + | 306 | WP_032345574.1 | hypothetical protein | - |
| EKI55_RS28545 () | 128662..129345 | + | 684 | WP_001553732.1 | DNA methylase | - |
| EKI55_RS28550 () | 129346..129567 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| EKI55_RS28555 () | 129581..130015 | + | 435 | WP_032345571.1 | DUF1380 family protein | - |
| EKI55_RS28560 () | 130060..130830 | + | 771 | WP_032345569.1 | hypothetical protein | - |
| EKI55_RS28570 () | 131371..131673 | + | 303 | WP_072164941.1 | antirestriction protein | - |
| EKI55_RS28575 () | 131720..132142 | + | 423 | WP_032345566.1 | DUF1380 family protein | - |
| EKI55_RS28580 () | 132139..132330 | + | 192 | WP_001027522.1 | hypothetical protein | - |
| EKI55_RS28960 () | 132605..132853 | - | 249 | WP_089577661.1 | hypothetical protein | - |
| EKI55_RS28595 () | 133172..133354 | + | 183 | Protein_146 | single-stranded DNA-binding protein | - |
| EKI55_RS28600 () | 133542..134729 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| EKI55_RS28605 () | 134729..135094 | - | 366 | WP_032345630.1 | hypothetical protein | - |
| EKI55_RS28610 () | 135370..136557 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| EKI55_RS28615 () | 136557..136922 | - | 366 | WP_032345630.1 | hypothetical protein | - |
| EKI55_RS28620 () | 137098..137988 | + | 891 | WP_001542500.1 | Recombination-promoting nuclease RpnA | VF |
| EKI55_RS28625 () | 137988..138233 | + | 246 | WP_077791233.1 | hypothetical protein | - |
| EKI55_RS28630 () | 138264..138515 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| EKI55_RS28645 () | 139095..139943 | + | 849 | Protein_154 | DUF4942 domain-containing protein | - |
| EKI55_RS28650 () | 140029..140364 | - | 336 | WP_032345614.1 | hypothetical protein | - |
| EKI55_RS28655 () | 140597..140929 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| EKI55_RS28660 () | 140941..143652 | + | 2712 | WP_032345612.1 | Protein TraI | Relaxase |
| EKI55_RS28665 () | 143720..144151 | + | 432 | WP_072097949.1 | tolA family protein | - |
| EKI55_RS28670 () | 144249..144437 | - | 189 | WP_047082780.1 | hypothetical protein | - |
| EKI55_RS28680 () | 144497..145710 | + | 1214 | WP_085949589.1 | IS3 family transposase ISEc31 | Transposase |
| EKI55_RS28685 () | 145786..146100 | - | 315 | WP_050439663.1 | hypothetical protein | - |
| EKI55_RS28690 () | 146093..146770 | + | 678 | WP_032327097.1 | IS66 family transposase ISCro1 | Transposase |
| EKI55_RS28695 () | 146770..147117 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EKI55_RS28700 () | 147137..148708 | + | 1572 | WP_000381335.1 | IS66 family transposase ISCro1 | Transposase |
| EKI55_RS28705 () | 148899..151202 | - | 2304 | WP_032345662.1 | TraM recognition domain-containing protein | - |
| EKI55_RS28710 () | 151183..152301 | - | 1119 | WP_032345664.1 | DsbC family protein | - |
| EKI55_RS28715 () | 152298..153569 | - | 1272 | WP_032345667.1 | IncI1-type conjugal transfer protein TrbA | - |
| EKI55_RS28730 () | 154352..154663 | - | 312 | WP_029365223.1 | hypothetical protein | - |
| EKI55_RS28735 () | 154691..154882 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| EKI55_RS28740 () | 154895..155257 | - | 363 | WP_000997721.1 | hypothetical protein | - |
| EKI55_RS28755 () | 155591..156268 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| EKI55_RS28760 () | 156268..156615 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|