MGE detailed information
MGE type: Prophage MGE length: 33462 bp
Accession: NZ_CP032679 Location: 1631007..1664468 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_CP032679 Location: 1631007..1664468 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D7U33_RS07880 () | 1627522..1628268 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| D7U33_RS07885 () | 1628357..1629043 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| D7U33_RS07890 () | 1629220..1629423 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| D7U33_RS07895 () | 1629458..1630918 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| D7U33_RS07900 () | 1631007..1632374 | - | 1368 | Protein_1543 | MHS family MFS transporter | - |
| D7U33_RS07905 () | 1632895..1633008 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| D7U33_RS07910 () | 1633077..1633310 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| D7U33_RS07915 () | 1633627..1634217 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| D7U33_RS07920 () | 1634315..1634890 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| D7U33_RS07925 () | 1634890..1635852 | - | 963 | WP_001027733.1 | phage tail protein | - |
| D7U33_RS07930 () | 1635803..1636372 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| D7U33_RS07935 () | 1636761..1636994 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| D7U33_RS07940 () | 1637052..1637462 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| D7U33_RS07945 () | 1637614..1637787 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| D7U33_RS07950 () | 1637959..1638114 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| D7U33_RS07955 () | 1638193..1638258 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| D7U33_RS07960 () | 1638261..1638449 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| D7U33_RS07965 () | 1638460..1638672 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| D7U33_RS07970 () | 1639035..1639532 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| D7U33_RS07975 () | 1639529..1640062 | - | 534 | WP_001092971.1 | lysozyme | - |
| D7U33_RS07980 () | 1640059..1640370 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| D7U33_RS07985 () | 1640375..1640590 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| D7U33_RS07990 () | 1641344..1641559 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| D7U33_RS07995 () | 1641860..1642072 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| D7U33_RS08000 () | 1642127..1642216 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| D7U33_RS08005 () | 1642494..1643246 | - | 753 | WP_001047135.1 | antitermination protein | - |
| D7U33_RS08010 () | 1643260..1644309 | - | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| D7U33_RS08015 () | 1644311..1644589 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| D7U33_RS08020 () | 1644656..1644907 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| D7U33_RS08025 () | 1645124..1645279 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| D7U33_RS08030 () | 1645351..1645638 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| D7U33_RS08035 () | 1645638..1645877 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| D7U33_RS08040 () | 1645902..1646207 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| D7U33_RS08045 () | 1646410..1646742 | + | 333 | WP_001301033.1 | protein FlxA | - |
| D7U33_RS08050 () | 1647179..1647328 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| D7U33_RS08055 () | 1647363..1647641 | - | 279 | Protein_1574 | hypothetical protein | - |
| D7U33_RS08060 () | 1647625..1647855 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| D7U33_RS08065 () | 1647939..1648346 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| D7U33_RS08070 () | 1648513..1648668 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| D7U33_RS08075 () | 1648828..1649046 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| D7U33_RS08080 () | 1649614..1649802 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| D7U33_RS08085 () | 1649799..1649990 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| D7U33_RS08090 () | 1650083..1650850 | + | 768 | Protein_1581 | exonuclease | - |
| D7U33_RS08095 () | 1650847..1651542 | + | 696 | Protein_1582 | IS3 family transposase IS2 | Transposase |
| D7U33_RS08100 () | 1651556..1652713 | + | 1158 | Protein_1583 | Putative defective protein IntQ ; Integrase | Integrase |
| D7U33_RS08105 () | 1652733..1652843 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| D7U33_RS08110 () | 1652901..1653920 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| D7U33_RS08115 () | 1653932..1655146 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| D7U33_RS08120 () | 1655352..1655678 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| D7U33_RS08125 () | 1655813..1656154 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| D7U33_RS08130 () | 1656189..1656749 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| D7U33_RS08135 () | 1656752..1657462 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| D7U33_RS08140 () | 1657570..1657875 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| D7U33_RS08145 () | 1658074..1660500 | + | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| D7U33_RS08150 () | 1660561..1662984 | + | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| D7U33_RS08155 () | 1662995..1663612 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| D7U33_RS08160 () | 1663614..1664468 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| D7U33_RS08165 () | 1664511..1665125 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| D7U33_RS08170 () | 1665284..1666576 | + | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| D7U33_RS08175 () | 1666529..1667224 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| D7U33_RS08180 () | 1667349..1668569 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0 |