MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NZ_CP030017 Location: 1853080..1896307 Organism: Streptococcus suis strain ISU1606 Replicon: chromosome
Accession: NZ_CP030017 Location: 1853080..1896307 Organism: Streptococcus suis strain ISU1606 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK235_RS09075 () | 1849022..1852141 | + | 3120 | WP_053865986.1 | LPXTG cell wall anchor domain-containing protein | - |
| DK235_RS09080 () | 1852221..1853087 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| DK235_RS09085 () | 1853080..1854084 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| DK235_RS09090 () | 1854230..1855003 | - | 774 | WP_012027854.1 | NUDIX hydrolase | - |
| DK235_RS09095 () | 1854996..1855817 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| DK235_RS09100 () | 1855827..1856864 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| DK235_RS09105 () | 1856978..1859431 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| DK235_RS09110 () | 1859437..1859895 | - | 459 | WP_012027859.1 | transcriptional regulator | - |
| DK235_RS09115 () | 1860045..1860383 | + | 339 | WP_012027860.1 | thiol reductase thioredoxin | - |
| DK235_RS09120 () | 1860383..1861084 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| DK235_RS09125 () | 1861347..1862387 | - | 1041 | WP_012027862.1 | elongation factor Ts | - |
| DK235_RS09130 () | 1862543..1863319 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| DK235_RS09135 () | 1863666..1864178 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| DK235_RS09145 () | 1864832..1869910 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| DK235_RS09150 () | 1870054..1870593 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| DK235_RS09155 () | 1870703..1870879 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| DK235_RS09160 () | 1870889..1871041 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| DK235_RS09165 () | 1871075..1873288 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| DK235_RS09170 () | 1873441..1874409 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| DK235_RS09175 () | 1874411..1875277 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| DK235_RS09180 () | 1875304..1876116 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| DK235_RS09185 () | 1876218..1877084 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| DK235_RS09190 () | 1877084..1878025 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| DK235_RS09195 () | 1878015..1879253 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| DK235_RS09200 () | 1879254..1879886 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| DK235_RS09205 () | 1879879..1880538 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| DK235_RS09210 () | 1880553..1881428 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| DK235_RS09220 () | 1882325..1883902 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein/permease | - |
| DK235_RS09225 () | 1883899..1885146 | - | 1248 | WP_012027879.1 | radical SAM protein | - |
| DK235_RS09230 () | 1885509..1886372 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| DK235_RS09235 () | 1886862..1889306 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| DK235_RS09240 () | 1889319..1891049 | - | 1731 | WP_012775361.1 | membrane protein | - |
| DK235_RS09245 () | 1891414..1892322 | - | 909 | WP_012027884.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| DK235_RS09250 () | 1892306..1892836 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| DK235_RS09255 () | 1892850..1893107 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| DK235_RS09260 () | 1893109..1893369 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DK235_RS09265 () | 1893445..1893900 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| DK235_RS09270 () | 1893907..1894236 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DK235_RS09275 () | 1894226..1894513 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| DK235_RS09280 () | 1894611..1894979 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| DK235_RS09285 () | 1894972..1895541 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| DK235_RS09290 () | 1895525..1896307 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| DK235_RS09295 () | 1896414..1896551 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| DK235_RS09300 () | 1896719..1897714 | - | 996 | WP_012775367.1 | protein jag | - |
| DK235_RS09305 () | 1897734..1898546 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| DK235_RS09310 () | 1898530..1898889 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| DK235_RS09315 () | 1898960..1900354 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |