MGE detailed information
MGE type: Prophage MGE length: 67790 bp
Accession: NZ_CP026079 Location: 1613902..1681691 Organism: Staphylococcus aureus strain FDAARGOS_9 Replicon: chromosome
Accession: NZ_CP026079 Location: 1613902..1681691 Organism: Staphylococcus aureus strain FDAARGOS_9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK67_RS08215 () | 1609009..1609143 | + | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| RK67_RS08220 () | 1609743..1610528 | - | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| RK67_RS08225 () | 1610889..1611515 | - | 627 | WP_000522381.1 | nitroreductase family protein | - |
| RK67_RS08230 () | 1611712..1612959 | + | 1248 | WP_000120296.1 | hypothetical protein | - |
| RK67_RS08235 () | 1612984..1613727 | - | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| RK67_RS08240 () | 1613902..1614186 | + | 285 | WP_000917289.1 | co-chaperone GroES | - |
| RK67_RS08245 () | 1614262..1615878 | + | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| RK67_RS08250 () | 1615947..1617119 | - | 1173 | WP_000179343.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| RK67_RS08255 () | 1617133..1617807 | - | 675 | WP_000620857.1 | helix-turn-helix transcriptional regulator | - |
| RK67_RS08260 () | 1617980..1618198 | + | 219 | WP_000153640.1 | helix-turn-helix transcriptional regulator | - |
| RK67_RS08265 () | 1618203..1618520 | + | 318 | WP_000481967.1 | helix-turn-helix domain-containing protein | - |
| RK67_RS08270 () | 1618517..1618663 | + | 147 | WP_000784885.1 | hypothetical protein | - |
| RK67_RS08275 () | 1618656..1618865 | + | 210 | WP_001058495.1 | hypothetical protein | Antitoxin Detail |
| RK67_RS08280 () | 1618868..1619194 | + | 327 | WP_001078344.1 | DUF1474 family protein | Toxin Detail |
| RK67_RS08285 () | 1619259..1620128 | + | 870 | WP_001002689.1 | primase alpha helix C-terminal domain-containing protein | - |
| RK67_RS08290 () | 1620142..1621851 | + | 1710 | WP_000447473.1 | DUF927 domain-containing protein | - |
| RK67_RS08295 () | 1622161..1622541 | + | 381 | WP_000356942.1 | hypothetical protein | - |
| RK67_RS08300 () | 1622538..1623179 | + | 642 | WP_001047698.1 | hypothetical protein | - |
| RK67_RS08305 () | 1623629..1623970 | + | 342 | WP_001190615.1 | hypothetical protein | - |
| RK67_RS08310 () | 1623982..1624560 | + | 579 | WP_000846280.1 | hypothetical protein | - |
| RK67_RS08315 () | 1624578..1624796 | + | 219 | WP_000448770.1 | capsid morphogenesis B protein | - |
| RK67_RS08320 () | 1624847..1625374 | + | 528 | WP_000771368.1 | spore coat protein | - |
| RK67_RS08325 () | 1625377..1625718 | + | 342 | WP_000358774.1 | hypothetical protein | - |
| RK67_RS08330 () | 1625715..1626284 | + | 570 | WP_001293088.1 | terminase small subunit | - |
| RK67_RS08335 () | 1626439..1627143 | - | 705 | WP_001035599.1 | Toxic shock syndrome toxin-1 | VF |
| RK67_RS14640 () | 1627566..1627873 | + | 308 | Protein_1550 | pathogenicity island protein | - |
| RK67_RS08340 () | 1628022..1628582 | - | 561 | WP_001035616.1 | DUF4888 domain-containing protein | - |
| RK67_RS08345 () | 1629369..1630169 | + | 801 | WP_000278088.1 | Enterotoxin type C-3 | VF |
| RK67_RS08350 () | 1630338..1631060 | - | 723 | WP_000746599.1 | Enterotoxin type A | VF |
| RK67_RS08360 () | 1632077..1633384 | - | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| RK67_RS08365 () | 1633828..1635051 | - | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| RK67_RS08370 () | 1635487..1636542 | + | 1056 | WP_000791411.1 | putative leukocidin-like protein 2 | VF |
| RK67_RS08375 () | 1636564..1637580 | + | 1017 | WP_000595392.1 | putative leukocidin-like protein 1 | VF |
| RK67_RS08380 () | 1637818..1638648 | - | 831 | Protein_1558 | Phospholipase C | VF |
| RK67_RS08385 () | 1638699..1639736 | - | 1038 | WP_000857180.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RK67_RS08390 () | 1639799..1640041 | - | 243 | WP_000427213.1 | hypothetical protein | - |
| RK67_RS08395 () | 1640052..1641035 | - | 984 | WP_001558608.1 | Putative teichuronic acid biosynthesis glycosyltransferase TuaG | VF |
| RK67_RS08400 () | 1641135..1641317 | - | 183 | WP_000694772.1 | hypothetical protein | - |
| RK67_RS08405 () | 1641521..1641862 | - | 342 | WP_000591749.1 | hypothetical protein | - |
| RK67_RS08410 () | 1641868..1642800 | - | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| RK67_RS08415 () | 1642816..1643529 | - | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| RK67_RS08420 () | 1643492..1643666 | + | 175 | Protein_1566 | transcriptional regulator | - |
| RK67_RS08425 () | 1643663..1643926 | + | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| RK67_RS08430 () | 1643942..1644157 | + | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| RK67_RS08435 () | 1644146..1644475 | - | 330 | WP_000128909.1 | hypothetical protein | - |
| RK67_RS08440 () | 1644526..1645278 | + | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| RK67_RS08445 () | 1645294..1645491 | + | 198 | WP_001148856.1 | hypothetical protein | - |
| RK67_RS08450 () | 1645478..1645858 | - | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| RK67_RS08455 () | 1645913..1646236 | + | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| RK67_RS08460 () | 1646233..1646394 | + | 162 | WP_000048129.1 | DUF1270 family protein | - |
| RK67_RS08465 () | 1646489..1646791 | + | 303 | WP_000165371.1 | DUF2482 family protein | - |
| RK67_RS08470 () | 1646796..1647056 | + | 261 | WP_000291510.1 | DUF1108 family protein | - |
| RK67_RS08475 () | 1647065..1647328 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| RK67_RS08480 () | 1647337..1649280 | + | 1944 | WP_000700554.1 | AAA family ATPase | - |
| RK67_RS08485 () | 1649282..1650202 | + | 921 | WP_000180600.1 | recombinase RecT | - |
| RK67_RS08490 () | 1650283..1650900 | + | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| RK67_RS08495 () | 1650901..1651371 | + | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| RK67_RS08500 () | 1651401..1652294 | + | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| RK67_RS08505 () | 1652301..1652519 | + | 219 | WP_000338528.1 | hypothetical protein | - |
| RK67_RS08510 () | 1652528..1652932 | + | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| RK67_RS08515 () | 1652945..1653316 | + | 372 | WP_000101279.1 | hypothetical protein | - |
| RK67_RS08520 () | 1653316..1653573 | + | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| RK67_RS08525 () | 1653570..1653818 | + | 249 | WP_000178987.1 | hypothetical protein | - |
| RK67_RS08530 () | 1653833..1654078 | + | 246 | WP_001065108.1 | DUF1024 family protein | - |
| RK67_RS08535 () | 1654075..1654611 | + | 537 | WP_000185693.1 | dUTPase | - |
| RK67_RS08540 () | 1654648..1654893 | + | 246 | WP_001282077.1 | hypothetical protein | - |
| RK67_RS08545 () | 1654890..1655096 | + | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| RK67_RS08550 () | 1655093..1655242 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| RK67_RS08555 () | 1655242..1655442 | + | 201 | WP_001557462.1 | DUF1514 family protein | - |
| RK67_RS08560 () | 1655470..1655886 | + | 417 | WP_000590122.1 | hypothetical protein | - |
| RK67_RS08565 () | 1656118..1656417 | + | 300 | WP_000988332.1 | HNH endonuclease | - |
| RK67_RS08570 () | 1656549..1656893 | + | 345 | WP_000402904.1 | hypothetical protein | - |
| RK67_RS08575 () | 1656890..1658551 | + | 1662 | WP_000625088.1 | terminase large subunit | - |
| RK67_RS08580 () | 1658567..1659754 | + | 1188 | WP_000025274.1 | phage portal protein | - |
| RK67_RS08585 () | 1659738..1660475 | + | 738 | WP_000642728.1 | Clp protease ClpP | - |
| RK67_RS08590 () | 1660499..1661644 | + | 1146 | WP_000154559.1 | phage major capsid protein | - |
| RK67_RS08595 () | 1661664..1661948 | + | 285 | WP_000238236.1 | hypothetical protein | - |
| RK67_RS08600 () | 1661938..1662222 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| RK67_RS08605 () | 1662206..1662568 | + | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| RK67_RS08610 () | 1662565..1662969 | + | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| RK67_RS08615 () | 1662966..1663373 | + | 408 | WP_000565498.1 | hypothetical protein | - |
| RK67_RS08620 () | 1663374..1664018 | + | 645 | WP_000268740.1 | phage tail protein | - |
| RK67_RS08625 () | 1664060..1664284 | + | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| RK67_RS08630 () | 1664334..1664684 | + | 351 | WP_001096355.1 | hypothetical protein | - |
| RK67_RS14630 () | 1664735..1664872 | + | 138 | WP_001549167.1 | hypothetical protein | - |
| RK67_RS08635 () | 1664929..1669458 | + | 4530 | WP_000504568.1 | phage tail tape measure protein | - |
| RK67_RS08640 () | 1669455..1670939 | + | 1485 | WP_000567396.1 | phage tail family protein | - |
| RK67_RS08645 () | 1670955..1674737 | + | 3783 | WP_000582152.1 | hypothetical protein | - |
| RK67_RS08650 () | 1674730..1674882 | + | 153 | WP_001000058.1 | hypothetical protein | - |
| RK67_RS08655 () | 1674928..1675215 | + | 288 | WP_001262621.1 | hypothetical protein | - |
| RK67_RS08660 () | 1675271..1675645 | + | 375 | WP_000340977.1 | hypothetical protein | - |
| RK67_RS08665 () | 1676066..1676839 | + | 774 | WP_025174055.1 | Enterotoxin type E | VF |
| RK67_RS08670 () | 1677042..1677218 | + | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| - () | 1677206..1677380 | - | 175 | - | - | Antitoxin Detail |
| RK67_RS08680 () | 1677430..1677684 | + | 255 | WP_000611512.1 | phage holin | - |
| RK67_RS08685 () | 1677696..1678451 | + | 756 | WP_000861026.1 | CHAP domain-containing protein | - |
| RK67_RS08690 () | 1678642..1679133 | + | 492 | WP_000920042.1 | Staphylokinase | VF |
| RK67_RS08705 () | 1679780..1680114 | + | 335 | Protein_1622 | SH3 domain-containing protein | - |
| RK67_RS08710 () | 1680209..1680658 | - | 450 | WP_000727645.1 | Chemotaxis inhibitory protein | VF |
| RK67_RS08715 () | 1681341..1681691 | + | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| RK67_RS08720 () | 1681744..1682004 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| RK67_RS08730 () | 1682319..1682498 | - | 180 | WP_000669789.1 | hypothetical protein | - |
| RK67_RS08735 () | 1682820..1683070 | - | 251 | Protein_1627 | sphingomyelin phosphodiesterase | - |
| RK67_RS08740 () | 1683456..1684886 | + | 1431 | WP_001557458.1 | extracellular adherence protein Eap/Map | - |
| RK67_RS08745 () | 1684901..1685191 | + | 291 | WP_000671712.1 | MAP domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA6360, TA10116, TA20387 | NC_002745 | 2006528..2074317 | 0 |