NZ_CP0222801..191691

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 191691 bp
Accession: NZ_CP022280        Location: 1..191691         Organism: Escherichia coli strain STEC299       Replicon: plasmid pSTEC299_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CFI09_RS25665 () 475..672 + 198 Protein_1 IS630 family transposase ISEc40 Transposase
CFI09_RS27675 () 681..881 + 201 Protein_2 IS3 family transposase ISBmu11 Transposase
CFI09_RS25675 () 1204..1473 + 270 WP_000343793.1 hypothetical protein -
CFI09_RS27680 () 1461..2016 + 556 Protein_4 hypothetical protein -
CFI09_RS25685 () 2655..5351 + 2697 WP_101973897.1 Outer membrane protein IcsA autotransporter VF
CFI09_RS25700 () 5929..6269 - 341 Protein_6 hypothetical protein -
CFI09_RS25710 () 6619..7221 + 603 WP_101973898.1 proQ/FINO family protein -
CFI09_RS25715 () 7324..7590 + 267 WP_101973981.1 hypothetical protein -
CFI09_RS25725 () 8118..8399 - 282 WP_101973900.1 hypothetical protein -
CFI09_RS25730 () 8506..8781 - 276 WP_000421259.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
CFI09_RS25735 () 8781..9065 - 285 WP_033804286.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
CFI09_RS25750 () 9952..10323 + 372 WP_101973982.1 DUF305 domain-containing protein -
CFI09_RS25755 () 10310..11374 + 1065 WP_101973902.1 hypothetical protein -
CFI09_RS25760 () 11811..12569 + 759 WP_101973903.1 hypothetical protein VF
CFI09_RS25765 () 12660..13664 + 1005 WP_032334768.1 IS110 family transposase ISSfl8 Transposase
CFI09_RS25780 () 14801..15658 - 858 WP_158639744.1 incFII family plasmid replication initiator RepA -
CFI09_RS25785 () 15651..15725 - 75 WP_001365705.1 RepA leader peptide Tap -
CFI09_RS25795 () 15963..16217 - 255 WP_000083830.1 replication regulatory protein RepA -
CFI09_RS25800 () 16457..17047 - 591 WP_101973907.1 DUF2726 domain-containing protein -
CFI09_RS25805 () 17085..17294 - 210 WP_101973908.1 hemolysin expression modulator Hha -
CFI09_RS25810 () 17340..17801 - 462 WP_101973909.1 thermonuclease family protein -
CFI09_RS25815 () 18047..18259 - 213 WP_001299730.1 ANR family transcriptional regulator -
CFI09_RS25820 () 18395..18955 - 561 WP_001567328.1 fertility inhibition protein FinO -
CFI09_RS25825 () 19010..19756 - 747 WP_101973910.1 conjugal transfer pilus acetylase TraX -
CFI09_RS25830 () 19776..23687 - 3912 Protein_25 Multifunctional conjugation protein TraI Relaxase
CFI09_RS25835 () 23721..26677 - 2957 Protein_26 Tn3 family transposase TnpA_ISPa40 Transposase
CFI09_RS25840 () 26658..27281 - 624 WP_000904945.1 Tn3 family transposase TnpR_ISMpo10 Transposase
CFI09_RS25845 () 27477..28808 + 1332 Protein_28 Multifunctional conjugation protein TraI Relaxase
CFI09_RS25850 () 28828..29574 + 747 WP_101973910.1 conjugal transfer pilus acetylase TraX -
CFI09_RS25855 () 29629..30189 + 561 WP_001567328.1 fertility inhibition protein FinO -
CFI09_RS25860 () 30325..30537 + 213 WP_001299730.1 ANR family transcriptional regulator -
CFI09_RS25865 () 30783..31244 + 462 WP_101973909.1 thermonuclease family protein -
CFI09_RS25870 () 31290..31499 + 210 WP_101973908.1 hemolysin expression modulator Hha -
CFI09_RS25875 () 31537..32127 + 591 WP_101973907.1 DUF2726 domain-containing protein -
CFI09_RS25880 () 32282..32746 + 465 WP_101973911.1 hypothetical protein -
- () 32898..32954 - 57 NuclAT_0 - Antitoxin Detail
- () 32898..32954 - 57 NuclAT_0 - Antitoxin Detail
- () 32898..32954 - 57 NuclAT_0 - Antitoxin Detail
- () 32898..32954 - 57 NuclAT_0 - Antitoxin Detail
CFI09_RS25890 () 33002..33151 + 150 WP_001312851.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
CFI09_RS25895 () 33435..33689 + 255 WP_000083830.1 replication regulatory protein RepA -
CFI09_RS25905 () 33926..34000 + 75 WP_032144212.1 RepA leader peptide Tap -
CFI09_RS25910 () 33993..35015 + 1023 WP_101973912.1 replication initiation protein -
CFI09_RS25920 () 35941..36225 + 285 WP_101973913.1 DUF1778 domain-containing protein Antitoxin Detail
CFI09_RS25925 () 36213..36698 + 486 WP_101973914.1 GNAT family N-acetyltransferase Toxin Detail
CFI09_RS27440 () 36682..37174 - 493 Protein_42 Serine protease pic autotransporter VF
CFI09_RS27685 () 37202..37448 + 247 Protein_43 DNA-binding protein -
CFI09_RS25945 () 37663..39435 + 1773 WP_101973916.1 Hemolysin transporter protein ShlB VF
CFI09_RS25950 () 39448..49272 + 9825 WP_158639746.1 Toxin CdiA VF
CFI09_RS25955 () 49274..49579 + 306 WP_101973917.1 hypothetical protein -
CFI09_RS25960 () 50496..50738 + 243 WP_045148685.1 hypothetical protein -
CFI09_RS25965 () 50880..51539 - 660 Protein_48 Tn3 family transposase ISPsy39 Transposase
CFI09_RS25970 () 51626..52372 - 747 WP_001016257.1 IS21 family transposase ISEc12 Transposase
CFI09_RS25980 () 52527..53549 + 1023 WP_101973680.1 IS21 family transposase IS100kyp Transposase
CFI09_RS25985 () 53546..54328 + 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
CFI09_RS25990 () 54338..55888 - 1551 WP_101973919.1 IS21 family transposase ISEc12 Transposase
CFI09_RS25995 () 56080..58410 - 2331 Protein_53 Tn3 family transposase TnpA_ISXc4 Transposase
CFI09_RS26000 () 58436..59059 - 624 WP_101973920.1 Tn3 family transposase TnpR_TnEc1 Transposase
CFI09_RS26005 () 59210..60319 + 1110 Protein_55 pore-forming bacteriocin colicin B -
CFI09_RS26010 () 60337..60864 - 528 WP_016233052.1 colicin B immunity protein -
CFI09_RS26020 () 61108..61923 + 816 WP_001382745.1 lipid II-degrading bacteriocin colicin M -
CFI09_RS26025 () 61973..62326 - 354 WP_000864812.1 colicin M immunity protein -
CFI09_RS26030 () 62499..63281 - 783 WP_077125144.1 site-specific integrase -
CFI09_RS26035 () 63283..63696 - 414 WP_000465043.1 hypothetical protein -
CFI09_RS26040 () 64263..64520 + 258 WP_000343099.1 hypothetical protein -
CFI09_RS26045 () 64520..65110 + 591 WP_101973921.1 hypothetical protein -
CFI09_RS26050 () 65389..66708 + 1320 WP_101973922.1 AAA family ATPase -
CFI09_RS26060 () 67963..68403 + 441 Protein_65 IS3 family transposase ISKpn38 Transposase
CFI09_RS27690 () 68482..68589 + 108 Protein_66 transposase -
CFI09_RS26065 () 68640..69837 - 1198 Protein_67 IS110 family transposase ISEc20 Transposase
CFI09_RS26070 () 70956..71432 + 477 WP_000072546.1 hypothetical protein VF
CFI09_RS26075 () 71435..72913 + 1479 WP_000150696.1 hypothetical protein VF
CFI09_RS26080 () 72923..73444 + 522 WP_087896586.1 type VI secretion protein -
CFI09_RS26085 () 73453..73875 + 423 WP_000555553.1 hypothetical protein -
CFI09_RS26090 () 73868..75670 + 1803 WP_101973924.1 type VI secretion system baseplate subunit TssF -
CFI09_RS26095 () 75661..76593 + 933 WP_000268398.1 type VI secretion system baseplate subunit TssG -
CFI09_RS26100 () 76606..78645 + 2040 WP_101973925.1 type VI secretion system tip protein VgrG -
CFI09_RS26105 () 78656..79123 + 468 WP_032179440.1 hypothetical protein -
CFI09_RS26110 () 79132..79431 + 300 WP_101973926.1 PAAR domain-containing protein -
CFI09_RS26115 () 79435..80511 + 1077 WP_101973927.1 type VI secretion system protein TssA -
CFI09_RS26120 () 80519..81070 + 552 WP_101973928.1 type VI secretion lipoprotein TssJ -
CFI09_RS26125 () 81089..82453 + 1365 WP_101973929.1 type VI secretion system baseplate subunit TssK -
CFI09_RS26135 () 82807..83424 + 618 WP_101973985.1 hypothetical protein VF
CFI09_RS26140 () 83431..86835 + 3405 WP_101973931.1 type VI secretion protein -
CFI09_RS26145 () 86839..89367 + 2529 WP_000109202.1 Protein ClpV1 VF
CFI09_RS26150 () 90069..91214 + 1146 WP_101973932.1 type VI secretion system ImpA family N-terminal domain-containing protein -
CFI09_RS26155 () 91401..91901 + 501 WP_101973933.1 kinesin -
CFI09_RS26160 () 91940..92503 + 564 WP_101973934.1 hypothetical protein -
CFI09_RS26165 () 92802..93323 + 522 WP_199769558.1 hypothetical protein -
CFI09_RS26170 () 93510..94100 + 591 WP_101973936.1 hypothetical protein VF
CFI09_RS26180 () 94917..95459 - 543 Protein_88 IS21 family transposase ISSso4 Transposase
CFI09_RS26185 () 95677..96266 + 590 Protein_89 hypothetical protein VF
CFI09_RS26190 () 96395..96901 + 507 WP_033800623.1 hypothetical protein -
CFI09_RS26195 () 97213..97512 + 300 WP_101973987.1 hypothetical protein -
CFI09_RS26200 () 97798..98394 + 597 WP_101973937.1 hypothetical protein -
CFI09_RS26205 () 98450..98656 + 207 WP_101973938.1 hemolysin expression modulator Hha -
CFI09_RS26210 () 98731..99237 + 507 WP_101973988.1 IS66 family insertion sequence hypothetical protein -
CFI09_RS26215 () 99465..99839 - 375 Protein_95 IS4 family transposase ISSfl1 Transposase
CFI09_RS26220 () 99926..100573 + 648 WP_101973939.1 IS66 family transposase ISCro1 Transposase
CFI09_RS26225 () 100573..100884 + 312 WP_032211263.1 IS66 family transposase ISCro1 Transposase
CFI09_RS26230 () 101482..101730 + 249 WP_199769555.1 reverse transcriptase N-terminal domain-containing protein -
CFI09_RS26235 () 101793..101942 - 150 Protein_99 Hin recombinase -
CFI09_RS26240 () 101942..102601 - 660 Protein_100 IS91 family transposase IS91 Transposase
CFI09_RS26245 () 102601..102966 - 366 WP_101973940.1 transposase -
CFI09_RS26250 () 103424..103810 - 387 WP_101973941.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
CFI09_RS26255 () 103807..104031 - 225 WP_000493532.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
CFI09_RS26270 () 104758..105738 + 981 WP_101973943.1 plasmid segregation protein ParM -
CFI09_RS26275 () 105741..106163 + 423 WP_000774832.1 plasmid partitioning/stability family protein -
CFI09_RS26280 () 106167..106478 + 312 WP_101973944.1 hypothetical protein -
CFI09_RS26285 () 106562..107281 + 720 WP_101973945.1 DUF1281 domain-containing protein -
CFI09_RS26290 () 107297..108079 - 783 WP_101973946.1 IS21 family transposase ISSen8 Transposase
CFI09_RS26295 () 108076..109098 - 1023 WP_101973947.1 IS21 family transposase ISSen8 Transposase
CFI09_RS26300 () 109188..109379 + 192 Protein_110 IS110 family transposase -
CFI09_RS27695 () 109508..109827 + 320 Protein_111 pilus assembly protein -
CFI09_RS27700 () 109806..109997 - 192 WP_001024835.1 hypothetical protein -
CFI09_RS26315 () 109994..110416 - 423 WP_101973948.1 DUF1380 family protein -
CFI09_RS26320 () 110463..110765 - 303 WP_101973949.1 antirestriction protein -
CFI09_RS27705 () 111056..111826 - 771 WP_199769556.1 hypothetical protein -
CFI09_RS26335 () 111871..112305 - 435 WP_101973950.1 DUF1380 family protein -
CFI09_RS26340 () 112317..112538 - 222 WP_001104887.1 hypothetical protein -
CFI09_RS26345 () 112539..113222 - 684 WP_101973951.1 DNA methylase -
CFI09_RS26350 () 113501..114520 - 1020 WP_089622478.1 IS110 family transposase ISEc11 Transposase
CFI09_RS27710 () 114739..115050 - 312 Protein_120 hypothetical protein -
CFI09_RS27450 () 115184..115474 - 291 WP_199769559.1 DUF1281 domain-containing protein -
CFI09_RS27455 () 115471..115614 - 144 WP_001358230.1 DUF1281 domain-containing protein -
CFI09_RS26370 () 115779..116556 - 778 Protein_123 IS4 family transposase ISEc13 Transposase
CFI09_RS26380 () 116792..117754 - 963 WP_101973954.1 ParB/RepB/Spo0J family partition protein -
CFI09_RS26385 () 117751..118956 - 1206 WP_000817644.1 Plasmid partition protein A VF
CFI09_RS26395 () 119330..119542 + 213 WP_032334873.1 hypothetical protein -
CFI09_RS26400 () 119715..119966 + 252 WP_001132895.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
CFI09_RS26405 () 119963..120250 + 288 WP_001270417.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
CFI09_RS26410 () 120249..120530 + 282 Protein_129 IS3 family transposase ISKpn37 Transposase
CFI09_RS26420 () 121180..122156 + 977 Protein_130 RepB family plasmid replication initiator protein -
CFI09_RS26425 () 122416..123644 + 1229 WP_158639709.1 IS3 family transposase IS2 Transposase
CFI09_RS26430 () 123721..124461 - 741 WP_101973955.1 tyrosine-type recombinase/integrase -
CFI09_RS27460 () 125197..125568 + 372 Protein_133 autotransporter outer membrane beta-barrel domain-containing protein -
CFI09_RS26445 () 126229..130761 + 4533 WP_101973989.1 autotransporter outer membrane beta-barrel domain-containing protein -
CFI09_RS26455 () 131515..132207 + 693 WP_020219205.1 hypothetical protein -
CFI09_RS27465 () 132747..133100 - 354 Protein_136 IS3 family transposase -
CFI09_RS26460 () 133131..134624 - 1494 Protein_137 IS66 family transposase -
CFI09_RS26465 () 135477..135665 + 189 WP_020219146.1 hypothetical protein -
CFI09_RS26475 () 136267..136680 + 414 WP_020219148.1 hypothetical protein -
CFI09_RS26480 () 136786..137271 + 486 WP_101973990.1 polymer-forming cytoskeletal protein -
CFI09_RS26485 () 137438..137848 + 411 WP_101973956.1 hypothetical protein -
CFI09_RS26490 () 137956..139017 + 1062 WP_101973991.1 EAL domain-containing protein -
CFI09_RS26495 () 139531..140692 - 1162 Protein_143 IS3 family transposase -
CFI09_RS26500 () 140959..141778 - 820 Protein_144 IS3 family transposase -
CFI09_RS26505 () 141866..142888 + 1023 WP_101973680.1 IS21 family transposase IS100kyp Transposase
CFI09_RS26510 () 142885..143667 + 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
CFI09_RS26515 () 143733..144886 - 1154 Protein_147 IS3 family transposase ISKpn38 Transposase
CFI09_RS26520 () 144940..146267 + 1328 Protein_148 IS66 family transposase IS679 Transposase
CFI09_RS26525 () 146297..146515 - 219 Protein_149 IS4 family transposase IS186A Transposase
CFI09_RS26535 () 147276..147545 + 270 WP_101973957.1 Major pilu subunit operon regulatory protein PapB VF
CFI09_RS26540 () 147621..148412 + 792 WP_101973992.1 Chaperone protein caf1M VF
CFI09_RS26545 () 148595..151162 + 2568 WP_101973958.1 F1 capsule-anchoring protein VF
CFI09_RS26550 () 151205..151639 + 435 WP_199769560.1 Protein AfaD VF
CFI09_RS26555 () 152388..152909 + 522 WP_101973959.1 hypothetical protein -
CFI09_RS26560 () 153053..153828 - 776 Protein_155 IS3 family transposase IS629 Transposase
CFI09_RS26565 () 154054..154872 - 819 Protein_156 ISL3 family transposase ISEc38 Transposase
CFI09_RS26575 () 155533..159357 + 3825 WP_101973961.1 Temperature-sensitive hemagglutinin tsh autotransporter VF
CFI09_RS26580 () 160159..160842 - 684 Protein_158 IS110 family transposase ISEch3 Transposase
CFI09_RS26585 () 160841..161050 + 210 Protein_159 IS66 family transposase ISEc22 Transposase
CFI09_RS26590 () 161228..161563 - 336 Protein_160 IS3 family transposase -
CFI09_RS26595 () 161608..162438 - 831 WP_101973962.1 AraC family transcriptional regulator -
CFI09_RS26605 () 163203..163367 + 165 Protein_162 integrase core domain-containing protein -
CFI09_RS26610 () 163413..163808 - 396 WP_101973963.1 type II secretion system pilot lipoprotein GspS -
CFI09_RS26615 () 163880..164722 - 843 WP_101973964.1 Type 4 prepilin-like proteins leader peptide-processing enzyme VF
CFI09_RS26620 () 164794..165282 - 489 WP_101973965.1 type II secretion system protein M -
CFI09_RS26625 () 165275..166537 - 1263 WP_101973966.1 Type II secretion system protein L VF
CFI09_RS26630 () 166471..167448 - 978 WP_101973967.1 Putative type II secretion system protein K VF
CFI09_RS26635 () 167448..168044 - 597 WP_101973968.1 Type II secretion system protein J VF
CFI09_RS26640 () 168041..168406 - 366 WP_101973969.1 Type II secretion system protein I VF
CFI09_RS26645 () 168403..168954 - 552 WP_101973970.1 hypothetical protein VF
CFI09_RS26650 () 168951..169385 - 435 WP_101973971.1 Type II secretion system protein G VF
CFI09_RS26655 () 169412..170635 - 1224 WP_101973972.1 Type II secretion system protein F VF
CFI09_RS26660 () 170622..172142 - 1521 WP_101973973.1 Type II secretion system protein E VF
CFI09_RS26665 () 172139..174070 - 1932 WP_101973994.1 Type II secretion system protein D VF
CFI09_RS26670 () 174110..174919 - 810 WP_101973995.1 Type II secretion system protein C VF
CFI09_RS26675 () 175063..177720 - 2658 WP_101973974.1 Metalloprotease StcE VF
CFI09_RS26685 () 178310..179169 + 860 Protein_177 IS3 family transposase -
CFI09_RS26695 () 179451..180512 + 1062 Protein_178 IS110 family transposase ISEc21 Transposase
CFI09_RS26700 () 180556..180818 + 263 Protein_179 IS3 family transposase IS911 Transposase
CFI09_RS26705 () 180879..181849 - 971 Protein_180 IS481 family transposase ISEc18 Transposase
CFI09_RS26710 () 181911..182659 - 749 Protein_181 IS21-like element helper ATPase IstB -
CFI09_RS26715 () 182682..182960 - 279 Protein_182 IS21 family transposase IS21 Transposase
CFI09_RS26725 () 183097..184119 - 1023 WP_101973996.1 apolipoprotein acyltransferase -
CFI09_RS26730 () 184334..184963 - 630 WP_101973976.1 putative ABC transporter ATP-binding protein YknY VF
CFI09_RS26735 () 184960..185772 - 813 WP_199769557.1 HlyD family secretion protein -
CFI09_RS26740 () 185696..186829 - 1134 WP_101973998.1 TolC family protein -
CFI09_RS26745 () 186907..188034 - 1128 WP_101973977.1 FtsX-like permease family protein -
CFI09_RS26750 () 188112..188471 - 360 WP_101973978.1 hypothetical protein VF
CFI09_RS26755 () 188991..189431 + 441 WP_101973979.1 thermonuclease family protein -
CFI09_RS26760 () 189623..190112 + 490 Protein_190 IS3 family transposase ISKpn38 Transposase
CFI09_RS26765 () 190157..190996 + 840 Protein_191 IS630 family transposase ISEc40 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance