MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 31765 bp
Accession: NZ_CP021735 Location: 1..31765 Organism: Escherichia coli strain AR_0114 Replicon: plasmid unitig_4
Accession: NZ_CP021735 Location: 1..31765 Organism: Escherichia coli strain AR_0114 Replicon: plasmid unitig_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM361_RS25880 () | 755..1873 | - | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| AM361_RS25885 () | 1866..2774 | - | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| AM361_RS25890 () | 2771..3457 | - | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| AM361_RS25910 () | 3972..5066 | - | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| AM361_RS25915 () | 5078..5794 | - | 717 | WP_000832283.1 | type IV secretion system VirB5 protein | - |
| AM361_RS25920 () | 5806..8553 | - | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| AM361_RS25925 () | 8572..8844 | - | 273 | WP_001328551.1 | Type IV secretion system protein virB2 | VF |
| AM361_RS25930 () | 8912..9532 | - | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| AM361_RS25935 () | 9890..10105 | - | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| AM361_RS25940 () | 10102..10395 | - | 294 | WP_000134733.1 | LuxR family transcriptional regulator | - |
| AM361_RS25945 () | 10472..11701 | - | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| AM361_RS25950 () | 11705..12208 | - | 504 | WP_000781813.1 | hypothetical protein | - |
| AM361_RS25960 () | 12569..12916 | - | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| AM361_RS25965 () | 12913..13161 | - | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| AM361_RS25970 () | 13466..13816 | - | 351 | WP_000854259.1 | hypothetical protein | - |
| AM361_RS25975 () | 13907..14206 | - | 300 | WP_000650309.1 | hypothetical protein | - |
| AM361_RS25985 () | 14660..14887 | - | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| AM361_RS25990 () | 14874..15125 | - | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| AM361_RS25995 () | 15122..15664 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| AM361_RS26500 () | 15769..16284 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
| AM361_RS26005 () | 17699..18565 | + | 867 | WP_001353743.1 | replication initiation protein | - |
| AM361_RS26010 () | 18578..18982 | + | 405 | WP_012421203.1 | hypothetical protein | - |
| AM361_RS26015 () | 19117..19644 | + | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| AM361_RS26030 () | 20228..20479 | - | 252 | WP_000928750.1 | hypothetical protein | - |
| AM361_RS26035 () | 20515..20817 | - | 303 | WP_001096507.1 | hypothetical protein | - |
| AM361_RS26040 () | 20911..21570 | - | 660 | WP_000516222.1 | hypothetical protein | VF |
| AM361_RS26045 () | 21675..22499 | - | 825 | WP_001353741.1 | Tyrosine recombinase XerD | VF |
| AM361_RS26050 () | 23055..23711 | - | 657 | WP_000972912.1 | hypothetical protein | - |
| AM361_RS26055 () | 23815..24279 | - | 465 | WP_001293141.1 | H-NS histone family protein | - |
| AM361_RS26060 () | 24297..24503 | - | 207 | WP_000850856.1 | hemolysin expression modulator Hha | - |
| AM361_RS26065 () | 24500..26653 | - | 2154 | WP_001235750.1 | type IA DNA topoisomerase | - |
| AM361_RS26070 () | 26658..27233 | - | 576 | WP_001199074.1 | hypothetical protein | - |
| AM361_RS26075 () | 27339..27743 | - | 405 | WP_001218543.1 | hypothetical protein | - |
| AM361_RS26080 () | 27759..28253 | - | 495 | WP_001215680.1 | thermonuclease family protein | - |
| AM361_RS26085 () | 28250..28558 | - | 309 | WP_000647576.1 | hypothetical protein | - |
| AM361_RS26090 () | 28661..28915 | - | 255 | WP_000415096.1 | hypothetical protein | - |
| AM361_RS26095 () | 28921..29226 | - | 306 | WP_000147044.1 | IncN plasmid KikA protein | - |
| AM361_RS26100 () | 29210..29629 | - | 420 | WP_000737411.1 | hypothetical protein | - |
| AM361_RS26105 () | 29641..31503 | - | 1863 | WP_000847106.1 | type IV secretory system conjugative DNA transfer family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain JIE143 transconjugant Tx143 | Non-Mobilizable plasmid | TA10150, TA10151, TA20092 | JN194214 | 1..34345 | 0.004 |