MGE detailed information
MGE type: Genomic_island MGE length: 9834 bp
Accession: NZ_CP019280 Location: 3402025..3411858 Organism: Escherichia coli strain 13P484A Replicon: chromosome
Accession: NZ_CP019280 Location: 3402025..3411858 Organism: Escherichia coli strain 13P484A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWI90_RS17895 () | 3397858..3399189 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| BWI90_RS17900 () | 3399211..3400200 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| BWI90_RS17910 () | 3400299..3401237 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| BWI90_RS28065 () | 3401551..3401769 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| BWI90_RS27635 () | 3402025..3402267 | + | 243 | WP_123009844.1 | hypothetical protein | - |
| BWI90_RS27640 () | 3402277..3402563 | + | 287 | Protein_3240 | hypothetical protein | - |
| BWI90_RS17925 () | 3402585..3403772 | + | 1188 | WP_024238569.1 | YhaC family protein | - |
| BWI90_RS17935 () | 3404682..3405827 | - | 1146 | WP_032298172.1 | glycerate 2-kinase | - |
| BWI90_RS17940 () | 3405924..3406814 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| BWI90_RS17945 () | 3406844..3407614 | - | 771 | WP_001723934.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| BWI90_RS17950 () | 3407630..3408964 | - | 1335 | WP_001723935.1 | galactarate/glucarate/glycerate transporter GarP | - |
| BWI90_RS17955 () | 3409339..3410910 | + | 1572 | WP_001723936.1 | galactarate dehydratase | - |
| BWI90_RS17960 () | 3411059..3411394 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| BWI90_RS17965 () | 3411394..3411858 | + | 465 | WP_148119790.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| BWI90_RS17970 () | 3411913..3412722 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| BWI90_RS17980 () | 3412971..3414251 | + | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| BWI90_RS17985 () | 3414274..3414747 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| BWI90_RS17990 () | 3414758..3415537 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| BWI90_RS17995 () | 3415527..3416405 | + | 879 | WP_001300474.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| BWI90_RS18000 () | 3416423..3416857 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1047 | NC_000913 | 3267854..3277801 | 0.01 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22703 | NC_010473 | 3363621..3373568 | 0.01 | |
| Escherichia coli BW2952 | Genomic island | TA23871 | NC_012759 | 3153024..3162971 | 0.01 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29016 | NC_020518 | 2741187..2751134 | 0.01 | |
| Escherichia coli BW25113 | Genomic island | TA48700 | NZ_CP009273 | 3261213..3271160 | 0.01 |