MGE detailed information
MGE type: Genomic_island MGE length: 11673 bp
Accession: NZ_CP019245 Location: 2291837..2303509 Organism: Escherichia coli strain Combat13F7 Replicon: chromosome
Accession: NZ_CP019245 Location: 2291837..2303509 Organism: Escherichia coli strain Combat13F7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWI83_RS11665 () | 2286838..2287272 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| BWI83_RS11670 () | 2287290..2288168 | - | 879 | WP_001300474.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| BWI83_RS11675 () | 2288158..2288937 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| BWI83_RS11680 () | 2288948..2289421 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| BWI83_RS11685 () | 2289444..2290724 | - | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| BWI83_RS11695 () | 2290973..2291782 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| BWI83_RS11700 () | 2291837..2292301 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| BWI83_RS11705 () | 2292301..2292636 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| BWI83_RS11710 () | 2292785..2294356 | - | 1572 | WP_001723936.1 | galactarate dehydratase | - |
| BWI83_RS11715 () | 2294731..2296065 | + | 1335 | WP_089075269.1 | galactarate/glucarate/glycerate transporter GarP | - |
| BWI83_RS11720 () | 2296081..2296851 | + | 771 | WP_001723934.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| BWI83_RS11725 () | 2296881..2297771 | + | 891 | WP_089075270.1 | 2-hydroxy-3-oxopropionate reductase | - |
| BWI83_RS11730 () | 2297868..2299013 | + | 1146 | WP_001424370.1 | glycerate 2-kinase | - |
| BWI83_RS11740 () | 2300036..2301223 | - | 1188 | WP_024238569.1 | YhaC family protein | - |
| BWI83_RS11745 () | 2301245..2301783 | - | 539 | Protein_2118 | hypothetical protein | - |
| BWI83_RS11750 () | 2302039..2302257 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| BWI83_RS11755 () | 2302571..2303509 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| BWI83_RS11765 () | 2303608..2304597 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| BWI83_RS11770 () | 2304619..2305950 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| BWI83_RS11775 () | 2305976..2307184 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.008 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.008 |