MGE detailed information
MGE type: Prophage MGE length: 34798 bp
Accession: NZ_CP018801 Location: 2221021..2255818 Organism: Escherichia coli strain tolC- Replicon: chromosome
Accession: NZ_CP018801 Location: 2221021..2255818 Organism: Escherichia coli strain tolC- Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BTD92_RS11625 () | 2216920..2218140 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| BTD92_RS11630 () | 2218265..2218960 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| BTD92_RS11635 () | 2218913..2220205 | - | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| BTD92_RS11640 () | 2220364..2220978 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| BTD92_RS11645 () | 2221021..2221875 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| BTD92_RS11650 () | 2221877..2222494 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| BTD92_RS11655 () | 2222505..2224928 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| BTD92_RS11660 () | 2224989..2227415 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| BTD92_RS11665 () | 2227614..2227919 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| BTD92_RS11670 () | 2228027..2228737 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| BTD92_RS11675 () | 2228740..2229300 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| BTD92_RS11680 () | 2229335..2229676 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| BTD92_RS11695 () | 2229781..2231009 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| BTD92_RS11700 () | 2231147..2231473 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| BTD92_RS11710 () | 2231679..2232893 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| BTD92_RS11715 () | 2232905..2233924 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| BTD92_RS11720 () | 2233982..2234092 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| BTD92_RS26175 () | 2234112..2235269 | - | 1158 | Protein_2103 | Putative defective protein IntQ ; Integrase | Integrase |
| BTD92_RS11730 () | 2235283..2235978 | - | 696 | Protein_2104 | IS3 family transposase IS2 | Transposase |
| BTD92_RS11735 () | 2235975..2236742 | - | 768 | Protein_2105 | exonuclease | - |
| BTD92_RS11740 () | 2236835..2237026 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| BTD92_RS11745 () | 2237023..2237211 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| BTD92_RS11755 () | 2237779..2237997 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| BTD92_RS11765 () | 2238157..2238312 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| BTD92_RS11770 () | 2238479..2238886 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| BTD92_RS11775 () | 2238970..2239200 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| BTD92_RS11780 () | 2239184..2239462 | + | 279 | Protein_2112 | hypothetical protein | - |
| BTD92_RS11785 () | 2239497..2239646 | + | 150 | WP_011443592.1 | hypothetical protein | - |
| BTD92_RS11790 () | 2240083..2240415 | - | 333 | WP_001301033.1 | protein FlxA | - |
| BTD92_RS11800 () | 2240618..2240923 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| BTD92_RS11805 () | 2240948..2241187 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| BTD92_RS11810 () | 2241187..2241474 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| BTD92_RS11815 () | 2241546..2241701 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| BTD92_RS11820 () | 2241918..2242169 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| BTD92_RS11825 () | 2242236..2242514 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| BTD92_RS11830 () | 2242516..2243565 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| BTD92_RS11835 () | 2243579..2244331 | + | 753 | WP_001047135.1 | antitermination protein | - |
| BTD92_RS26185 () | 2244609..2244698 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| BTD92_RS11840 () | 2244753..2244965 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| BTD92_RS11845 () | 2245266..2245481 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| BTD92_RS26740 () | 2245845..2246015 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| BTD92_RS11850 () | 2246235..2246450 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| BTD92_RS11855 () | 2246455..2246766 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| BTD92_RS11860 () | 2246763..2247296 | + | 534 | WP_001092971.1 | lysozyme | - |
| BTD92_RS11865 () | 2247293..2247790 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| BTD92_RS11870 () | 2248153..2248365 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| BTD92_RS11875 () | 2248376..2248564 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| BTD92_RS26190 () | 2248567..2248632 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| BTD92_RS11880 () | 2248711..2248866 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| BTD92_RS11885 () | 2249038..2249211 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| BTD92_RS11890 () | 2249363..2249773 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| BTD92_RS11895 () | 2249831..2250064 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| BTD92_RS11900 () | 2250453..2251022 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| BTD92_RS11905 () | 2250973..2251935 | + | 963 | WP_001027733.1 | phage tail protein | - |
| BTD92_RS11910 () | 2251935..2252510 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| BTD92_RS11915 () | 2252608..2253198 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| BTD92_RS11920 () | 2253515..2253748 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| BTD92_RS26195 () | 2253817..2253930 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| BTD92_RS11925 () | 2254451..2255818 | + | 1368 | Protein_2144 | MHS family MFS transporter | - |
| BTD92_RS11930 () | 2255907..2257367 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| BTD92_RS11935 () | 2257402..2257605 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| BTD92_RS11940 () | 2257782..2258468 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| BTD92_RS11945 () | 2258557..2259303 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0 |