MGE detailed information
MGE type: Prophage MGE length: 33462 bp
Accession: NZ_CP014225 Location: 4469926..4503387 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_CP014225 Location: 4469926..4503387 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AW869_RS22060 () | 4466441..4467187 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| AW869_RS22065 () | 4467276..4467962 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| AW869_RS22070 () | 4468139..4468342 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AW869_RS22075 () | 4468377..4469837 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| AW869_RS22080 () | 4469926..4471293 | - | 1368 | Protein_4187 | MHS family MFS transporter | - |
| AW869_RS25880 () | 4471814..4471927 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| AW869_RS22085 () | 4471996..4472229 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| AW869_RS22090 () | 4472546..4473136 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| AW869_RS22095 () | 4473234..4473809 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| AW869_RS22100 () | 4473809..4474771 | - | 963 | WP_001027733.1 | phage tail protein | - |
| AW869_RS22105 () | 4474722..4475291 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| AW869_RS22110 () | 4475680..4475913 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| AW869_RS22115 () | 4475971..4476381 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| AW869_RS22120 () | 4476533..4476706 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| AW869_RS22125 () | 4476878..4477033 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| AW869_RS25885 () | 4477112..4477177 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| AW869_RS24830 () | 4477180..4477368 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| AW869_RS22130 () | 4477379..4477591 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| AW869_RS22135 () | 4477954..4478451 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| AW869_RS22140 () | 4478448..4478981 | - | 534 | WP_001092971.1 | lysozyme | - |
| AW869_RS22145 () | 4478978..4479289 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| AW869_RS22150 () | 4479294..4479509 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| AW869_RS26230 () | 4479729..4479899 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| AW869_RS22155 () | 4480263..4480478 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| AW869_RS22160 () | 4480779..4480991 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| AW869_RS25890 () | 4481046..4481135 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| AW869_RS22165 () | 4481413..4482165 | - | 753 | WP_001047135.1 | antitermination protein | - |
| AW869_RS22170 () | 4482179..4483228 | - | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| AW869_RS22175 () | 4483230..4483508 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| AW869_RS22180 () | 4483575..4483826 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| AW869_RS22185 () | 4484043..4484198 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AW869_RS22190 () | 4484270..4484557 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| AW869_RS22195 () | 4484557..4484796 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| AW869_RS24835 () | 4484821..4485126 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| AW869_RS22200 () | 4485329..4485661 | + | 333 | WP_001301033.1 | protein FlxA | - |
| AW869_RS22205 () | 4486098..4486247 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| AW869_RS22210 () | 4486282..4486560 | - | 279 | Protein_4219 | hypothetical protein | - |
| AW869_RS22215 () | 4486544..4486774 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| AW869_RS22220 () | 4486858..4487265 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| AW869_RS22225 () | 4487432..4487587 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| AW869_RS22230 () | 4487747..4487965 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| AW869_RS22240 () | 4488533..4488721 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| AW869_RS22245 () | 4488718..4488909 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| AW869_RS24850 () | 4489002..4489769 | + | 768 | Protein_4226 | exonuclease | - |
| AW869_RS22255 () | 4489766..4490461 | + | 696 | Protein_4227 | IS3 family transposase IS2 | Transposase |
| AW869_RS25900 () | 4490475..4491632 | + | 1158 | Protein_4228 | Putative defective protein IntQ ; Integrase | Integrase |
| AW869_RS25440 () | 4491652..4491762 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| AW869_RS22265 () | 4491820..4492839 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| AW869_RS22270 () | 4492851..4494065 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| AW869_RS22275 () | 4494271..4494597 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| AW869_RS22280 () | 4494732..4495073 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| AW869_RS22285 () | 4495108..4495668 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| AW869_RS22290 () | 4495671..4496381 | - | 711 | WP_077872514.1 | YnfC family lipoprotein | - |
| AW869_RS22295 () | 4496489..4496794 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| AW869_RS22300 () | 4496993..4499419 | + | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| AW869_RS22305 () | 4499480..4501903 | + | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| AW869_RS22310 () | 4501914..4502531 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| AW869_RS22315 () | 4502533..4503387 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| AW869_RS22320 () | 4503430..4504044 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| AW869_RS22325 () | 4504203..4505495 | + | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| AW869_RS22330 () | 4505448..4506143 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| AW869_RS22335 () | 4506268..4507488 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0 |