MGE detailed information
MGE type: Prophage MGE length: 33462 bp
Accession: NZ_CP012127 Location: 1610572..1644033 Organism: Escherichia coli strain DH1Ec169 Replicon: chromosome
Accession: NZ_CP012127 Location: 1610572..1644033 Organism: Escherichia coli strain DH1Ec169 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ADZ28_RS07915 () | 1607087..1607833 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| ADZ28_RS07920 () | 1607922..1608608 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| ADZ28_RS07925 () | 1608785..1608988 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| ADZ28_RS07930 () | 1609023..1610483 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| ADZ28_RS07935 () | 1610572..1611939 | - | 1368 | Protein_1516 | MHS family MFS transporter | - |
| ADZ28_RS25345 () | 1612460..1612573 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| ADZ28_RS07940 () | 1612642..1612875 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| ADZ28_RS07945 () | 1613192..1613782 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| ADZ28_RS07950 () | 1613880..1614455 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| ADZ28_RS07955 () | 1614455..1615417 | - | 963 | WP_001027733.1 | phage tail protein | - |
| ADZ28_RS07960 () | 1615368..1615937 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| ADZ28_RS07965 () | 1616326..1616559 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| ADZ28_RS07970 () | 1616617..1617027 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| ADZ28_RS07975 () | 1617179..1617352 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| ADZ28_RS07980 () | 1617524..1617679 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| ADZ28_RS25350 () | 1617758..1617823 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| ADZ28_RS23545 () | 1617826..1618014 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| ADZ28_RS07985 () | 1618025..1618237 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| ADZ28_RS07990 () | 1618600..1619097 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| ADZ28_RS07995 () | 1619094..1619627 | - | 534 | WP_001092971.1 | lysozyme | - |
| ADZ28_RS08000 () | 1619624..1619935 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| ADZ28_RS08005 () | 1619940..1620155 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| ADZ28_RS08010 () | 1620909..1621124 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| ADZ28_RS08015 () | 1621425..1621637 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| ADZ28_RS25355 () | 1621692..1621781 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| ADZ28_RS08020 () | 1622059..1622811 | - | 753 | WP_001047135.1 | antitermination protein | - |
| ADZ28_RS08025 () | 1622825..1623874 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| ADZ28_RS08030 () | 1623876..1624154 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| ADZ28_RS08035 () | 1624221..1624472 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| ADZ28_RS08040 () | 1624689..1624844 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| ADZ28_RS08045 () | 1624916..1625203 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| ADZ28_RS08050 () | 1625203..1625442 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| ADZ28_RS23550 () | 1625467..1625772 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| ADZ28_RS08055 () | 1625975..1626307 | + | 333 | WP_001301033.1 | protein FlxA | - |
| ADZ28_RS22785 () | 1626744..1626893 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| ADZ28_RS08060 () | 1626928..1627206 | - | 279 | Protein_1547 | hypothetical protein | - |
| ADZ28_RS08065 () | 1627190..1627420 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| ADZ28_RS08070 () | 1627504..1627911 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| ADZ28_RS08075 () | 1628078..1628233 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| ADZ28_RS08080 () | 1628393..1628611 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| ADZ28_RS08090 () | 1629179..1629367 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| ADZ28_RS08095 () | 1629364..1629555 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| ADZ28_RS23565 () | 1629648..1630415 | + | 768 | Protein_1554 | exonuclease | - |
| ADZ28_RS08105 () | 1630412..1631107 | + | 696 | Protein_1555 | IS3 family transposase IS2 | Transposase |
| ADZ28_RS25365 () | 1631121..1632278 | + | 1158 | Protein_1556 | Putative defective protein IntQ ; Integrase | Integrase |
| ADZ28_RS24840 () | 1632298..1632408 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| ADZ28_RS08115 () | 1632466..1633485 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| ADZ28_RS08120 () | 1633497..1634711 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| ADZ28_RS08125 () | 1634917..1635243 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| ADZ28_RS08130 () | 1635378..1635719 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| ADZ28_RS08135 () | 1635754..1636314 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| ADZ28_RS08140 () | 1636317..1637027 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| ADZ28_RS08145 () | 1637135..1637440 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| ADZ28_RS08150 () | 1637639..1640065 | + | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| ADZ28_RS08155 () | 1640126..1642549 | + | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| ADZ28_RS08160 () | 1642560..1643177 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| ADZ28_RS08165 () | 1643179..1644033 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| ADZ28_RS08170 () | 1644076..1644690 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| ADZ28_RS08175 () | 1644849..1646141 | + | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| ADZ28_RS08180 () | 1646094..1646789 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| ADZ28_RS08185 () | 1646914..1648134 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0 |