NZ_CP0104384012175..4028175

MGE detailed information

MGE type: Genomic_island        MGE length: 16001 bp
Accession: NZ_CP010438        Location: 4012175..4028175         Organism: Escherichia coli K-12 strain K-12 MG1655       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
SH05_RS19835 () 4007460..4008824 - 1365 WP_000622126.1 L-serine ammonia-lyase -
SH05_RS19840 () 4008896..4009285 - 390 WP_000719990.1 enamine/imine deaminase -
SH05_RS19845 () 4009299..4011593 - 2295 WP_000861734.1 2-ketobutyrate formate-lyase/pyruvate formate-lyase -
SH05_RS24700 () 4011627..4012028 - 402 Protein_3756 propionate/acetate kinase -
SH05_RS19855 () 4012175..4013191 - 1017 WP_010723085.1 IS5 family transposase IS5D Transposase
SH05_RS19860 () 4013222..4014034 - 813 Protein_3758 acetate/propionate family kinase -
SH05_RS19865 () 4014060..4015391 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
SH05_RS19870 () 4015413..4016402 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
SH05_RS19875 () 4016501..4017439 - 939 WP_000104211.1 transcriptional regulator TdcA -
SH05_RS26070 () 4017754..4017972 + 219 WP_001301311.1 transcriptional activator TdcR -
SH05_RS19885 () 4018228..4018767 + 540 WP_000675733.1 hypothetical protein -
SH05_RS19890 () 4018789..4019976 + 1188 WP_000484600.1 YhaC family protein -
SH05_RS19895 () 4020999..4022144 - 1146 WP_001300387.1 glycerate 2-kinase -
SH05_RS19900 () 4022241..4023131 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
SH05_RS19905 () 4023161..4023931 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
SH05_RS19910 () 4023947..4025281 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
SH05_RS19915 () 4025656..4027227 + 1572 WP_001273753.1 galactarate dehydratase -
SH05_RS19920 () 4027376..4027711 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
SH05_RS19925 () 4027711..4028175 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
SH05_RS19930 () 4028230..4029039 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
SH05_RS19935 () 4029288..4030568 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
SH05_RS19940 () 4030591..4031064 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
SH05_RS19945 () 4031075..4031446 + 372 Protein_3775 PTS sugar transporter subunit IIC -
SH05_RS19950 () 4031442..4031999 + 558 Protein_3776 amidohydrolase family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.008
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.008
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.008
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.008
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.008