MGE detailed information
MGE type: Mobilizable plasmid MGE length: 63684 bp
Accession: NZ_CP010120 Location: 1..63684 Organism: Escherichia coli strain C3 Replicon: plasmid A
Accession: NZ_CP010120 Location: 1..63684 Organism: Escherichia coli strain C3 Replicon: plasmid A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG26_RS28950 () | 221..1387 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| RG26_RS28955 () | 1387..2358 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| RG26_RS28970 () | 3268..4169 | + | 902 | Protein_2 | DUF1281 domain-containing protein | - |
| RG26_RS28975 () | 4173..4478 | + | 306 | WP_032163515.1 | hypothetical protein | - |
| RG26_RS28980 () | 4555..5238 | + | 684 | WP_000085939.1 | DNA methylase | - |
| RG26_RS28985 () | 5239..5460 | + | 222 | WP_001104904.1 | hypothetical protein | - |
| RG26_RS28990 () | 5354..5908 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| RG26_RS30885 () | 5954..6730 | + | 777 | WP_001005032.1 | hypothetical protein | - |
| RG26_RS29005 () | 7267..7569 | + | 303 | WP_072095193.1 | antirestriction protein | - |
| RG26_RS29010 () | 7616..8038 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| RG26_RS29015 () | 8035..8226 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| RG26_RS30890 () | 8196..8705 | - | 510 | WP_032163513.1 | hypothetical protein | - |
| RG26_RS29035 () | 9023..9475 | + | 453 | WP_000290802.1 | single-stranded DNA-binding protein | - |
| RG26_RS29040 () | 9532..9765 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| RG26_RS29045 () | 9831..11789 | + | 1959 | WP_000117173.1 | ParB/RepB/Spo0J family partition protein | - |
| RG26_RS29050 () | 11844..12278 | + | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| RG26_RS29055 () | 12275..12994 | + | 720 | WP_000116348.1 | plasmid SOS inhibition protein A | - |
| - () | 13006..13204 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 13006..13204 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 13006..13204 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 13006..13204 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| RG26_RS29065 () | 13269..13427 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| RG26_RS30895 () | 13665..14024 | - | 360 | Protein_18 | hypothetical protein | - |
| RG26_RS30900 () | 14094..14300 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| RG26_RS29080 () | 14325..14612 | + | 288 | WP_000107542.1 | hypothetical protein | - |
| RG26_RS29085 () | 14731..15552 | + | 822 | WP_001234417.1 | DUF945 domain-containing protein | - |
| RG26_RS29090 () | 15848..16438 | - | 591 | WP_001375132.1 | hypothetical protein | VF |
| RG26_RS29100 () | 16790..17173 | + | 384 | WP_001063020.1 | relaxosome protein TraM | - |
| RG26_RS29105 () | 17341..18038 | - | 698 | Protein_24 | IS1-like element IS1A family transposase | - |
| RG26_RS29125 () | 18755..18955 | + | 201 | WP_024182490.1 | hypothetical protein | - |
| RG26_RS29130 () | 19060..19427 | + | 368 | Protein_26 | IS110 family transposase ISEc11 | Transposase |
| RG26_RS29135 () | 19529..19879 | + | 351 | Protein_27 | transposase family protein | - |
| RG26_RS29140 () | 19876..20628 | - | 753 | Protein_28 | Tn3 family transposase TnpA_Tn3 | Transposase |
| RG26_RS29145 () | 20753..21028 | - | 276 | WP_000421253.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RG26_RS29150 () | 21028..21312 | - | 285 | WP_024182491.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| RG26_RS29160 () | 22178..23035 | - | 858 | WP_000774299.1 | incFII family plasmid replication initiator RepA | - |
| RG26_RS29165 () | 23028..23510 | - | 483 | WP_000247130.1 | hypothetical protein | - |
| RG26_RS29170 () | 23503..23577 | - | 75 | WP_032164225.1 | RepA leader peptide Tap | - |
| RG26_RS29180 () | 23812..24069 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| RG26_RS29185 () | 24378..24860 | - | 483 | WP_000405244.1 | GNAT family N-acetyltransferase | Toxin Detail |
| RG26_RS29190 () | 24851..25153 | - | 303 | WP_001346256.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| RG26_RS29195 () | 25475..25681 | - | 207 | WP_032232098.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 25668..25729 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 25668..25729 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 25668..25729 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 25668..25729 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| RG26_RS29205 () | 26313..26525 | - | 213 | WP_032323685.1 | hypothetical protein | - |
| RG26_RS29210 () | 26657..27217 | - | 561 | WP_024244031.1 | fertility inhibition protein FinO | - |
| RG26_RS29215 () | 27272..28018 | - | 747 | WP_000205747.1 | conjugal transfer pilus acetylase TraX | - |
| RG26_RS29220 () | 28038..33308 | - | 5271 | WP_077898326.1 | Multifunctional conjugation protein TraI | Relaxase |
| RG26_RS29225 () | 33390..33617 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| RG26_RS29230 () | 33617..34015 | + | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| RG26_RS29235 () | 34024..36177 | - | 2154 | WP_040092615.1 | type IV conjugative transfer system coupling protein TraD | - |
| RG26_RS29240 () | 36430..37161 | - | 732 | WP_024248462.1 | complement resistance protein TraT | - |
| RG26_RS29245 () | 37210..37695 | - | 486 | WP_077827312.1 | surface exclusion protein | - |
| RG26_RS29265 () | 37768..38465 | + | 698 | Protein_47 | IS1-like element IS1A family transposase | - |
| RG26_RS29270 () | 39225..40374 | - | 1150 | Protein_48 | IS3 family transposase ISEc16 | Transposase |
| RG26_RS29280 () | 40693..41457 | - | 765 | WP_001434433.1 | hypothetical protein | VF |
| RG26_RS29285 () | 41487..42218 | - | 732 | WP_000780632.1 | hypothetical protein | VF |
| RG26_RS29290 () | 42403..43266 | - | 864 | WP_000751773.1 | hypothetical protein | - |
| RG26_RS29295 () | 43488..43979 | - | 492 | WP_000728530.1 | hypothetical protein | VF |
| RG26_RS29300 () | 44022..44798 | - | 777 | WP_001042687.1 | Chaperone protein FaeE | VF |
| RG26_RS29305 () | 44791..47163 | - | 2373 | WP_050553110.1 | Outer membrane usher protein YraJ | VF |
| RG26_RS29310 () | 47231..47770 | - | 540 | WP_024182495.1 | hypothetical protein | VF |
| RG26_RS29315 () | 48024..48950 | + | 927 | WP_024243976.1 | Right origin-binding protein | VF |
| RG26_RS29320 () | 49501..49644 | - | 144 | Protein_57 | Fimbria A protein | VF |
| RG26_RS29325 () | 49699..49914 | - | 216 | WP_000109991.1 | hypothetical protein | - |
| RG26_RS29330 () | 50934..51083 | + | 150 | WP_032164232.1 | hypothetical protein | - |
| RG26_RS29335 () | 51204..51944 | + | 741 | WP_001066934.1 | tyrosine-type recombinase/integrase | - |
| RG26_RS29340 () | 52223..53200 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| RG26_RS30705 () | 53965..55068 | + | 1104 | Protein_62 | colicin | - |
| RG26_RS29365 () | 55086..55433 | - | 348 | WP_001604436.1 | hypothetical protein | - |
| RG26_RS29370 () | 55552..55899 | + | 348 | WP_001775009.1 | hypothetical protein | - |
| RG26_RS30905 () | 55917..56078 | - | 162 | WP_000251882.1 | hypothetical protein | - |
| RG26_RS29375 () | 56322..60143 | + | 3822 | WP_032232022.1 | hypothetical protein | - |
| RG26_RS29380 () | 60700..60918 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| RG26_RS29385 () | 60920..61225 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | - |
| RG26_RS29390 () | 61226..62032 | + | 807 | WP_073519399.1 | site-specific integrase | - |
| RG26_RS29395 () | 62079..62375 | + | 297 | Protein_70 | RepB family plasmid replication initiator protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|