MGE detailed information
MGE type: Prophage MGE length: 42430 bp
Accession: NZ_CP009790 Location: 1585967..1628396 Organism: Xylella fastidiosa strain U24d Replicon: chromosome
Accession: NZ_CP009790 Location: 1585967..1628396 Organism: Xylella fastidiosa strain U24d Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFUD_RS07445 () | 1583015..1585606 | - | 2592 | WP_010894136.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
| XFUD_RS07450 () | 1585967..1586986 | - | 1020 | WP_010894137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| XFUD_RS07455 () | 1586976..1587233 | - | 258 | WP_010894138.1 | DUF4224 domain-containing protein | - |
| XFUD_RS07460 () | 1587252..1587707 | - | 456 | WP_010894139.1 | single-stranded DNA-binding protein | - |
| XFUD_RS07465 () | 1587777..1588409 | - | 633 | WP_010894140.1 | Bro-N domain-containing protein | - |
| XFUD_RS07470 () | 1588721..1589485 | - | 765 | WP_162009303.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | VF |
| XFUD_RS07475 () | 1589518..1591161 | - | 1644 | WP_010894142.1 | YqaJ viral recombinase family protein | - |
| XFUD_RS07480 () | 1591158..1592084 | - | 927 | WP_010894143.1 | phage recombination protein Bet | - |
| XFUD_RS07485 () | 1592100..1592921 | - | 822 | WP_010894144.1 | YfdQ family protein | - |
| XFUD_RS07490 () | 1592942..1593316 | - | 375 | WP_010894145.1 | hypothetical protein | - |
| XFUD_RS07495 () | 1593337..1593528 | - | 192 | WP_010894146.1 | hypothetical protein | - |
| XFUD_RS07500 () | 1593552..1593743 | - | 192 | WP_010894147.1 | hypothetical protein | - |
| XFUD_RS07505 () | 1593740..1594141 | - | 402 | WP_010894148.1 | hypothetical protein | - |
| XFUD_RS07510 () | 1594141..1594599 | - | 459 | WP_010894149.1 | hypothetical protein | - |
| XFUD_RS07515 () | 1594596..1595141 | - | 546 | WP_080507209.1 | hypothetical protein | - |
| XFUD_RS07520 () | 1595533..1595721 | + | 189 | WP_010894151.1 | antitoxin VbhA family protein | Antitoxin Detail |
| XFUD_RS07525 () | 1595718..1596329 | + | 612 | WP_010894152.1 | Fic/DOC family protein | Toxin Detail |
| XFUD_RS07530 () | 1596380..1597054 | - | 675 | WP_042463200.1 | helix-turn-helix transcriptional regulator | - |
| XFUD_RS07535 () | 1597139..1597384 | + | 246 | WP_042463203.1 | hypothetical protein | - |
| XFUD_RS07540 () | 1597381..1597686 | - | 306 | WP_042463205.1 | hypothetical protein | - |
| XFUD_RS07545 () | 1597827..1598012 | + | 186 | Protein_1357 | hypothetical protein | - |
| XFUD_RS07550 () | 1598066..1598254 | + | 189 | WP_042463208.1 | hypothetical protein | - |
| XFUD_RS07555 () | 1598251..1598499 | + | 249 | WP_010894156.1 | hypothetical protein | - |
| XFUD_RS07560 () | 1598496..1598879 | + | 384 | WP_042463212.1 | hypothetical protein | - |
| XFUD_RS07565 () | 1599083..1600195 | + | 1113 | WP_042463693.1 | Bro-N domain-containing protein | - |
| XFUD_RS07570 () | 1600192..1600500 | + | 309 | WP_023906549.1 | DUF1376 domain-containing protein | - |
| XFUD_RS07575 () | 1600497..1601585 | + | 1089 | WP_010894160.1 | YdaU family protein | - |
| XFUD_RS07580 () | 1601491..1602255 | + | 765 | WP_195780003.1 | hypothetical protein | - |
| XFUD_RS07585 () | 1602252..1602665 | + | 414 | WP_010894161.1 | hypothetical protein | - |
| XFUD_RS07590 () | 1602685..1603383 | + | 699 | WP_042463215.1 | hypothetical protein | - |
| XFUD_RS07595 () | 1603436..1603690 | + | 255 | WP_080507210.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| XFUD_RS07600 () | 1603687..1604022 | + | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| XFUD_RS07605 () | 1604284..1604781 | + | 498 | WP_042463169.1 | lysozyme | - |
| XFUD_RS07610 () | 1604774..1605103 | + | 330 | WP_010894063.1 | phage holin family protein | - |
| XFUD_RS07615 () | 1605093..1605554 | + | 462 | WP_010894064.1 | hypothetical protein | - |
| XFUD_RS07620 () | 1605556..1605768 | + | 213 | WP_042463172.1 | hypothetical protein | - |
| XFUD_RS07625 () | 1605859..1606257 | + | 399 | WP_010894066.1 | hypothetical protein | - |
| XFUD_RS07630 () | 1606208..1607758 | + | 1551 | Protein_1374 | phage terminase large subunit | - |
| XFUD_RS07635 () | 1607755..1609142 | + | 1388 | Protein_1375 | DUF1073 domain-containing protein | - |
| XFUD_RS07640 () | 1609191..1609472 | - | 282 | WP_004090283.1 | helix-turn-helix domain-containing protein | - |
| XFUD_RS07645 () | 1609469..1609807 | - | 339 | WP_010894070.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XFUD_RS07650 () | 1609880..1610725 | + | 846 | WP_010894071.1 | phage head morphogenesis protein | - |
| XFUD_RS07655 () | 1610725..1611915 | + | 1191 | WP_042463176.1 | DUF2213 domain-containing protein | - |
| XFUD_RS07660 () | 1611943..1612425 | + | 483 | WP_010894073.1 | hypothetical protein | - |
| XFUD_RS07665 () | 1612435..1613418 | + | 984 | WP_010894074.1 | DUF2184 domain-containing protein | - |
| XFUD_RS07670 () | 1613482..1613781 | + | 300 | WP_010894075.1 | hypothetical protein | - |
| XFUD_RS07675 () | 1613784..1614158 | + | 375 | WP_010894076.1 | DUF4054 domain-containing protein | - |
| XFUD_RS07680 () | 1614155..1614628 | + | 474 | WP_010894077.1 | hypothetical protein | - |
| XFUD_RS07685 () | 1614609..1614989 | + | 381 | WP_010894078.1 | hypothetical protein | - |
| XFUD_RS07690 () | 1614913..1615446 | + | 534 | WP_195780009.1 | hypothetical protein | - |
| XFUD_RS07695 () | 1615447..1616943 | + | 1497 | WP_010894080.1 | DUF3383 domain-containing protein | - |
| XFUD_RS07700 () | 1616953..1617390 | + | 438 | WP_010894081.1 | DUF3277 family protein | - |
| XFUD_RS07705 () | 1617387..1617809 | + | 423 | WP_010894082.1 | hypothetical protein | - |
| XFUD_RS07710 () | 1617957..1619846 | + | 1890 | WP_010894164.1 | hypothetical protein | - |
| XFUD_RS07715 () | 1620176..1620352 | + | 177 | WP_088371569.1 | Blp family class II bacteriocin | - |
| XFUD_RS07720 () | 1620386..1620574 | + | 189 | WP_010894166.1 | hypothetical protein | - |
| XFUD_RS07725 () | 1620579..1620749 | - | 171 | WP_010894167.1 | antitoxin | Antitoxin Detail |
| XFUD_RS07730 () | 1620802..1621077 | - | 276 | WP_042463219.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XFUD_RS07735 () | 1621061..1621288 | - | 228 | WP_031336679.1 | CopG family transcriptional regulator | Antitoxin Detail |
| XFUD_RS07740 () | 1621399..1622169 | + | 771 | WP_010894169.1 | hypothetical protein | - |
| XFUD_RS07745 () | 1622169..1622486 | + | 318 | WP_010894170.1 | hypothetical protein | - |
| XFUD_RS07750 () | 1622483..1623313 | + | 831 | WP_010894171.1 | hypothetical protein | - |
| XFUD_RS07755 () | 1623310..1623951 | + | 642 | WP_010894172.1 | hypothetical protein | - |
| XFUD_RS07760 () | 1623948..1624301 | + | 354 | WP_010894173.1 | hypothetical protein | - |
| XFUD_RS07765 () | 1624312..1624617 | - | 306 | WP_004089254.1 | putative addiction module antidote protein | Antitoxin Detail |
| XFUD_RS07770 () | 1624614..1624916 | - | 303 | WP_042463224.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XFUD_RS07775 () | 1625015..1626160 | + | 1146 | WP_042463227.1 | baseplate J/gp47 family protein | - |
| XFUD_RS07780 () | 1626157..1626717 | + | 561 | WP_010894176.1 | DUF2612 domain-containing protein | - |
| XFUD_RS07785 () | 1626721..1627884 | + | 1164 | WP_010894177.1 | phage tail protein | - |
| XFUD_RS07790 () | 1627917..1628396 | - | 480 | WP_010894178.1 | hypothetical protein | - |
| XFUD_RS07795 () | 1628430..1629545 | - | 1116 | WP_010894179.1 | HigA family addiction module antidote protein | - |
| XFUD_RS07800 () | 1629561..1629851 | - | 291 | WP_010894180.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XFUD_RS07805 () | 1630162..1630494 | + | 333 | WP_010894181.1 | DNA-binding transcriptional regulator | - |
| XFUD_RS07810 () | 1630698..1631042 | + | 345 | WP_031336656.1 | RidA family protein | - |
| XFUD_RS07820 () | 1631797..1632615 | - | 819 | WP_171817082.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|