MGE detailed information
MGE type: Genomic_island MGE length: 8321 bp
Accession: NZ_AP022069 Location: 4451543..4459863 Organism: Escherichia coli strain WP4-W18-ESBL-09 Replicon: chromosome
Accession: NZ_AP022069 Location: 4451543..4459863 Organism: Escherichia coli strain WP4-W18-ESBL-09 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R28_RS21205 () | 4448074..4448799 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| H7R28_RS21210 () | 4448836..4449375 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| H7R28_RS21215 () | 4449440..4449988 | - | 549 | WP_000695557.1 | type 1 fimbrial major subunit FimA | - |
| H7R28_RS21220 () | 4450469..4451065 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| H7R28_RS21225 () | 4451543..4452145 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| H7R28_RS21230 () | 4453601..4454317 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| H7R28_RS21235 () | 4454337..4455443 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| H7R28_RS21240 () | 4455508..4456488 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| H7R28_RS21245 () | 4457071..4458311 | - | 1241 | Protein_4154 | DNA helicase | - |
| H7R28_RS21250 () | 4458427..4458672 | + | 246 | Protein_4155 | GNAT family N-acetyltransferase | - |
| H7R28_RS21255 () | 4459049..4459306 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| H7R28_RS21260 () | 4459318..4459863 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| H7R28_RS21265 () | 4459919..4460665 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| H7R28_RS21270 () | 4460834..4461052 | + | 219 | Protein_4159 | hypothetical protein | - |
| H7R28_RS27020 () | 4461090..4461206 | + | 117 | Protein_4160 | VOC family protein | - |
| H7R28_RS21275 () | 4461451..4462572 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| H7R28_RS21280 () | 4462569..4462847 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| H7R28_RS21285 () | 4462859..4464172 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.01 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.01 |