MGE detailed information
MGE type: Genomic_island MGE length: 11673 bp
Accession: NZ_AP022030 Location: 605126..616798 Organism: Escherichia coli strain WP3-S18-ESBL-07 Replicon: chromosome
Accession: NZ_AP022030 Location: 605126..616798 Organism: Escherichia coli strain WP3-S18-ESBL-07 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R16_RS02880 () | 600127..600561 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| H7R16_RS02885 () | 600579..601457 | - | 879 | WP_001300474.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| H7R16_RS02890 () | 601447..602226 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| H7R16_RS02895 () | 602237..602710 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| H7R16_RS02900 () | 602733..604013 | - | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| H7R16_RS02905 () | 604262..605071 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| H7R16_RS02910 () | 605126..605590 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| H7R16_RS02915 () | 605590..605925 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| H7R16_RS02920 () | 606074..607645 | - | 1572 | WP_001723936.1 | galactarate dehydratase | - |
| H7R16_RS02925 () | 608020..609354 | + | 1335 | WP_001723935.1 | galactarate/glucarate/glycerate transporter GarP | - |
| H7R16_RS02930 () | 609370..610140 | + | 771 | WP_001723934.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| H7R16_RS02935 () | 610170..611060 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| H7R16_RS02940 () | 611157..612302 | + | 1146 | WP_001424370.1 | glycerate 2-kinase | - |
| H7R16_RS02950 () | 613325..614512 | - | 1188 | WP_049253626.1 | YhaC family protein | - |
| H7R16_RS02955 () | 614534..615072 | - | 539 | Protein_578 | hypothetical protein | - |
| H7R16_RS02960 () | 615328..615627 | - | 300 | WP_000248333.1 | transcriptional activator TdcR | - |
| H7R16_RS02965 () | 615860..616798 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| H7R16_RS02970 () | 616897..617886 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| H7R16_RS02975 () | 617908..619239 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| H7R16_RS02980 () | 619265..620473 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.008 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.008 |