MGE detailed information
MGE type: Prophage MGE length: 43194 bp
Accession: NZ_AP021946 Location: 2451962..2495155 Organism: Escherichia coli strain WP2-S18-ESBL-08 Replicon: chromosome
Accession: NZ_AP021946 Location: 2451962..2495155 Organism: Escherichia coli strain WP2-S18-ESBL-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R07_RS11890 () | 2447861..2449081 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| H7R07_RS11895 () | 2449206..2449901 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| H7R07_RS11900 () | 2449854..2451146 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| H7R07_RS11905 () | 2451305..2451919 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| H7R07_RS11910 () | 2451962..2452816 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| H7R07_RS11915 () | 2452818..2453435 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| H7R07_RS11920 () | 2453446..2455869 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| H7R07_RS11925 () | 2455930..2458356 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| H7R07_RS11930 () | 2458555..2458860 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| H7R07_RS11935 () | 2458968..2459678 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| H7R07_RS11940 () | 2459681..2460241 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| H7R07_RS11945 () | 2460276..2460617 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| H7R07_RS11950 () | 2460752..2461078 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| H7R07_RS11955 () | 2461284..2462498 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| H7R07_RS11960 () | 2462510..2463529 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| H7R07_RS11965 () | 2463587..2463697 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| H7R07_RS11970 () | 2463717..2464997 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| H7R07_RS11975 () | 2465032..2465283 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| H7R07_RS11980 () | 2465356..2467827 | - | 2472 | WP_000048342.1 | exonuclease | - |
| H7R07_RS11985 () | 2467920..2468111 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| H7R07_RS11990 () | 2468108..2468296 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| H7R07_RS11995 () | 2468864..2469082 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| H7R07_RS12000 () | 2469242..2469397 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| H7R07_RS12005 () | 2469564..2469971 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| H7R07_RS12010 () | 2470055..2470285 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| H7R07_RS12015 () | 2470269..2470790 | + | 522 | WP_000705358.1 | hypothetical protein | - |
| H7R07_RS12020 () | 2470771..2471736 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| H7R07_RS12025 () | 2471777..2472199 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| H7R07_RS12030 () | 2472313..2473200 | + | 888 | Protein_2359 | IS66 family transposase | - |
| H7R07_RS12035 () | 2473716..2473955 | - | 240 | Protein_2360 | IS66 family transposase ISEc22 | Transposase |
| H7R07_RS12040 () | 2474139..2474486 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| H7R07_RS12045 () | 2474483..2474887 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| H7R07_RS26620 () | 2475109..2475396 | + | 288 | Protein_2363 | hypothetical protein | - |
| H7R07_RS12050 () | 2476165..2477478 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| H7R07_RS12055 () | 2477915..2478247 | - | 333 | WP_001301033.1 | protein FlxA | - |
| H7R07_RS12060 () | 2478450..2478755 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| H7R07_RS12065 () | 2478780..2479019 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| H7R07_RS12070 () | 2479019..2479306 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| H7R07_RS12075 () | 2479378..2479533 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| H7R07_RS12080 () | 2479750..2480001 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| H7R07_RS12085 () | 2480068..2480346 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| H7R07_RS12090 () | 2480348..2481397 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| H7R07_RS12095 () | 2481411..2482163 | + | 753 | WP_001047135.1 | antitermination protein | - |
| H7R07_RS12100 () | 2482441..2482530 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| H7R07_RS12105 () | 2482585..2482797 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| H7R07_RS12110 () | 2483098..2483313 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| H7R07_RS12115 () | 2484067..2484282 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| H7R07_RS12120 () | 2484287..2484598 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| H7R07_RS12125 () | 2484595..2485128 | + | 534 | WP_001092971.1 | lysozyme | - |
| H7R07_RS12130 () | 2485125..2485622 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| H7R07_RS12135 () | 2485985..2486197 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| H7R07_RS12140 () | 2486208..2486396 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| H7R07_RS12145 () | 2486399..2486464 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| H7R07_RS12150 () | 2486544..2486699 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| H7R07_RS12155 () | 2486871..2487044 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| H7R07_RS12160 () | 2487196..2487606 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| H7R07_RS12165 () | 2487664..2487897 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| H7R07_RS12170 () | 2488286..2488831 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| H7R07_RS12175 () | 2488806..2490377 | + | 1572 | WP_099137173.1 | phage terminase large subunit family protein | - |
| H7R07_RS12180 () | 2490361..2491272 | + | 912 | WP_099137175.1 | phage tail protein | - |
| H7R07_RS12185 () | 2491272..2491847 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| H7R07_RS12190 () | 2491945..2492535 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| H7R07_RS12195 () | 2492852..2493085 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| H7R07_RS12200 () | 2493154..2493267 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| H7R07_RS12205 () | 2493788..2495155 | + | 1368 | Protein_2395 | MHS family MFS transporter | - |
| H7R07_RS12210 () | 2495244..2496704 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| H7R07_RS12215 () | 2496739..2496942 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| H7R07_RS12220 () | 2497119..2497805 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| H7R07_RS12225 () | 2497894..2498640 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0.008 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0.008 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0.008 |