MGE detailed information
MGE type: Prophage MGE length: 72622 bp
Accession: NZ_AP019543 Location: 2105961..2178582 Organism: Staphylococcus aureus strain KG-18 Replicon: chromosome
Accession: NZ_AP019543 Location: 2105961..2178582 Organism: Staphylococcus aureus strain KG-18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GDK18_RS10545 () | 2101467..2102147 | - | 681 | WP_000645727.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| GDK18_RS10550 () | 2102148..2103044 | - | 897 | WP_000991306.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| GDK18_RS10555 () | 2103041..2103421 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| GDK18_RS10560 () | 2103679..2103855 | - | 177 | WP_000681968.1 | hypothetical protein | - |
| GDK18_RS10565 () | 2104098..2104196 | - | 99 | WP_000990056.1 | hypothetical protein | - |
| GDK18_RS10570 () | 2104396..2105682 | + | 1287 | WP_001068542.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| GDK18_RS10575 () | 2105961..2106251 | - | 291 | WP_000671712.1 | hypothetical protein | VF |
| GDK18_RS10580 () | 2106262..2107695 | - | 1434 | WP_001558588.1 | hypothetical protein | VF |
| GDK18_RS10585 () | 2108081..2108331 | + | 251 | Protein_1995 | hypothetical protein | VF |
| GDK18_RS10590 () | 2108653..2108832 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| GDK18_RS10600 () | 2109147..2109407 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| GDK18_RS10605 () | 2109460..2109810 | - | 351 | WP_000702262.1 | hypothetical protein | VF |
| GDK18_RS10610 () | 2110493..2110942 | + | 450 | WP_000727645.1 | hypothetical protein | VF |
| GDK18_RS10615 () | 2111037..2111371 | - | 335 | Protein_2000 | SH3 domain-containing protein | - |
| GDK18_RS10630 () | 2112018..2112509 | - | 492 | WP_000920042.1 | hypothetical protein | VF |
| GDK18_RS10635 () | 2112700..2113455 | - | 756 | WP_000861026.1 | CHAP domain-containing protein | - |
| GDK18_RS10640 () | 2113467..2113721 | - | 255 | WP_000611512.1 | phage holin | - |
| GDK18_RS10645 () | 2113773..2113880 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2113802..2113941 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2113802..2113941 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2113802..2113941 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2113802..2113941 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| GDK18_RS10650 () | 2113933..2114109 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| GDK18_RS10655 () | 2114312..2115085 | - | 774 | WP_025174055.1 | hypothetical protein | VF |
| GDK18_RS10660 () | 2115506..2115880 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| GDK18_RS10665 () | 2115936..2116223 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| GDK18_RS10670 () | 2116269..2116421 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| GDK18_RS10675 () | 2116414..2120198 | - | 3785 | Protein_2010 | hypothetical protein | - |
| GDK18_RS10680 () | 2120214..2121698 | - | 1485 | WP_000567396.1 | phage tail family protein | - |
| GDK18_RS10685 () | 2121695..2126224 | - | 4530 | WP_000504568.1 | phage tail tape measure protein | - |
| GDK18_RS15360 () | 2126281..2126418 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| GDK18_RS10690 () | 2126469..2126819 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| GDK18_RS10695 () | 2126869..2127093 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| GDK18_RS10700 () | 2127135..2127779 | - | 645 | WP_152064754.1 | phage tail protein | - |
| GDK18_RS10705 () | 2127780..2128187 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| GDK18_RS10710 () | 2128184..2128588 | - | 405 | WP_152064755.1 | HK97 gp10 family phage protein | - |
| GDK18_RS10715 () | 2128585..2128947 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| GDK18_RS10720 () | 2128931..2129215 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| GDK18_RS10725 () | 2129205..2129489 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| GDK18_RS10730 () | 2129509..2130654 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| GDK18_RS10735 () | 2130678..2131415 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| GDK18_RS10740 () | 2131399..2132586 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| GDK18_RS10745 () | 2132602..2134263 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| GDK18_RS10750 () | 2134260..2134604 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| GDK18_RS10755 () | 2134735..2135034 | - | 300 | WP_000988332.1 | HNH endonuclease | - |
| GDK18_RS10760 () | 2135266..2135682 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| GDK18_RS10765 () | 2135710..2135910 | - | 201 | WP_001557462.1 | DUF1514 family protein | - |
| GDK18_RS10770 () | 2135910..2136059 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| GDK18_RS10775 () | 2136056..2136262 | - | 207 | WP_152064756.1 | DUF1381 domain-containing protein | - |
| GDK18_RS10780 () | 2136259..2136504 | - | 246 | WP_001282077.1 | hypothetical protein | - |
| GDK18_RS10785 () | 2136541..2137077 | - | 537 | WP_000185693.1 | dUTPase | - |
| GDK18_RS10790 () | 2137074..2137319 | - | 246 | WP_001065108.1 | DUF1024 family protein | - |
| GDK18_RS10795 () | 2137334..2137582 | - | 249 | WP_000178987.1 | hypothetical protein | - |
| GDK18_RS10800 () | 2137579..2137836 | - | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| GDK18_RS10805 () | 2137836..2138207 | - | 372 | WP_000101279.1 | hypothetical protein | - |
| GDK18_RS10810 () | 2138220..2138624 | - | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GDK18_RS10815 () | 2138633..2138851 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| GDK18_RS10820 () | 2138858..2139751 | - | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| GDK18_RS10825 () | 2139781..2140251 | - | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| GDK18_RS10830 () | 2140252..2140869 | - | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| GDK18_RS10835 () | 2140950..2141870 | - | 921 | WP_000180600.1 | recombinase RecT | - |
| GDK18_RS10840 () | 2141872..2143815 | - | 1944 | WP_000700554.1 | AAA family ATPase | - |
| GDK18_RS10845 () | 2143824..2144087 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| GDK18_RS10850 () | 2144096..2144356 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| GDK18_RS10855 () | 2144361..2144663 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| GDK18_RS10860 () | 2144758..2144919 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| GDK18_RS10865 () | 2144916..2145239 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| GDK18_RS10870 () | 2145294..2145674 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| GDK18_RS10875 () | 2145661..2145858 | - | 198 | WP_001148856.1 | hypothetical protein | - |
| GDK18_RS10880 () | 2145874..2146626 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| GDK18_RS10885 () | 2146677..2147006 | + | 330 | WP_000128909.1 | hypothetical protein | - |
| GDK18_RS10890 () | 2146995..2147210 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| GDK18_RS10895 () | 2147226..2147489 | - | 264 | Protein_2055 | helix-turn-helix transcriptional regulator | - |
| GDK18_RS10900 () | 2147486..2147660 | - | 175 | Protein_2056 | transcriptional regulator | - |
| GDK18_RS10905 () | 2147623..2148336 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| GDK18_RS10910 () | 2148352..2149284 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| GDK18_RS10915 () | 2149290..2149631 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| GDK18_RS10920 () | 2149835..2150017 | + | 183 | WP_000694772.1 | hypothetical protein | - |
| GDK18_RS10925 () | 2150117..2151100 | + | 984 | WP_001558608.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| GDK18_RS10930 () | 2151111..2151353 | + | 243 | WP_000427213.1 | hypothetical protein | - |
| GDK18_RS10935 () | 2151416..2152453 | + | 1038 | WP_000857180.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GDK18_RS10940 () | 2152504..2153334 | + | 831 | Protein_2064 | hypothetical protein | VF |
| GDK18_RS10945 () | 2153572..2154588 | - | 1017 | WP_000595392.1 | hypothetical protein | VF |
| GDK18_RS10950 () | 2154610..2155665 | - | 1056 | WP_000791411.1 | hypothetical protein | VF |
| GDK18_RS10955 () | 2156101..2157324 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| GDK18_RS10960 () | 2157768..2158475 | + | 708 | Protein_2068 | TrkH family potassium uptake protein | - |
| GDK18_RS10965 () | 2158523..2159695 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| GDK18_RS10970 () | 2159799..2160407 | + | 609 | Protein_2070 | TrkH family potassium uptake protein | - |
| GDK18_RS10980 () | 2161424..2162146 | + | 723 | WP_000746599.1 | Enterotoxin type A | VF |
| GDK18_RS10985 () | 2162315..2163115 | - | 801 | WP_000278088.1 | Enterotoxin type C-3 | VF |
| GDK18_RS10990 () | 2163903..2164463 | + | 561 | WP_152064757.1 | DUF4888 domain-containing protein | - |
| GDK18_RS10995 () | 2165341..2166045 | + | 705 | WP_001035599.1 | Toxic shock syndrome toxin-1 | VF |
| GDK18_RS11000 () | 2166200..2166769 | - | 570 | WP_001293088.1 | terminase small subunit | - |
| GDK18_RS11005 () | 2166766..2167107 | - | 342 | WP_000358774.1 | hypothetical protein | - |
| GDK18_RS11010 () | 2167110..2167637 | - | 528 | WP_000771368.1 | spore coat protein | - |
| GDK18_RS11015 () | 2167688..2167906 | - | 219 | WP_000448770.1 | capsid morphogenesis B protein | - |
| GDK18_RS11020 () | 2167924..2168502 | - | 579 | WP_000846280.1 | hypothetical protein | - |
| GDK18_RS11025 () | 2168514..2168855 | - | 342 | WP_001190615.1 | hypothetical protein | - |
| GDK18_RS11030 () | 2169305..2169946 | - | 642 | WP_001047698.1 | hypothetical protein | - |
| GDK18_RS11035 () | 2169943..2170323 | - | 381 | WP_000356942.1 | hypothetical protein | - |
| GDK18_RS11040 () | 2170633..2172342 | - | 1710 | WP_000447473.1 | DUF927 domain-containing protein | - |
| GDK18_RS11045 () | 2172356..2173225 | - | 870 | WP_152064758.1 | primase alpha helix C-terminal domain-containing protein | - |
| GDK18_RS11050 () | 2173290..2173616 | - | 327 | WP_001078344.1 | DUF1474 family protein | Toxin Detail |
| GDK18_RS11055 () | 2173619..2173768 | - | 150 | WP_025175789.1 | hypothetical protein | Antitoxin Detail |
| GDK18_RS11060 () | 2173821..2173967 | - | 147 | WP_000784885.1 | hypothetical protein | - |
| GDK18_RS11065 () | 2173964..2174281 | - | 318 | WP_000481967.1 | helix-turn-helix domain-containing protein | - |
| GDK18_RS11070 () | 2174286..2174504 | - | 219 | WP_000153640.1 | helix-turn-helix transcriptional regulator | - |
| GDK18_RS11075 () | 2174677..2175351 | + | 675 | WP_000620857.1 | helix-turn-helix transcriptional regulator | - |
| GDK18_RS11080 () | 2175365..2176537 | + | 1173 | WP_000179343.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| GDK18_RS11085 () | 2176606..2178222 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| GDK18_RS11090 () | 2178298..2178582 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| GDK18_RS11095 () | 2178757..2179500 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| GDK18_RS11100 () | 2179525..2180772 | - | 1248 | WP_152064759.1 | hypothetical protein | - |
| GDK18_RS11105 () | 2180969..2181595 | + | 627 | WP_000522381.1 | nitroreductase family protein | - |
| GDK18_RS11110 () | 2181956..2182741 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| GDK18_RS11115 () | 2183341..2183475 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA6360, TA10116, TA20387 | NC_002745 | 2006528..2074317 | 0.002 |