MGE detailed information
MGE type: Conjugative plasmid MGE length: 115452 bp
Accession: NC_022992 Location: 1..115452 Organism: Escherichia coli Replicon: plasmid pO111-CRL-115
Accession: NC_022992 Location: 1..115452 Organism: Escherichia coli Replicon: plasmid pO111-CRL-115
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTA80_RS00005 (D616_p107002) | 703..1575 | + | 873 | WP_000729440.1 | incFII family plasmid replication initiator RepA | - |
| HTA80_RS00010 (D616_p107004) | 2524..2775 | + | 252 | WP_001139207.1 | plasmid stabilization protein | Antitoxin Detail |
| HTA80_RS00015 (D616_p107005) | 2772..3059 | + | 288 | WP_000222775.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HTA80_RS00020 (D616_p107006) | 3069..3614 | + | 546 | WP_000926984.1 | hypothetical protein | - |
| HTA80_RS00025 (D616_p107008) | 4266..4868 | - | 603 | WP_000517694.1 | ProQ/FINO family protein | - |
| HTA80_RS00030 (D616_p107009) | 5222..5461 | + | 240 | Protein_5 | hypothetical protein | - |
| HTA80_RS00035 (D616_p107010) | 5496..8462 | - | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| HTA80_RS00040 (D616_p107011) | 8465..9025 | - | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| HTA80_RS00045 | 9151..9501 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HTA80_RS00050 (D616_p107014) | 9704..10717 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| HTA80_RS00055 (D616_p107015) | 10873..11346 | + | 474 | WP_001317507.1 | Dihydrofolate reductase type 1 | ARG |
| HTA80_RS00060 (D616_p107016) | 11498..12202 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HTA80_RS00065 (D616_p107017) | 12266..12604 | + | 339 | Protein_12 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HTA80_RS00070 (D616_p107018) | 12787..13647 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HTA80_RS00075 (D616_p107019) | 13794..14075 | + | 282 | Protein_14 | transposase zinc-binding domain-containing protein | - |
| HTA80_RS00080 (D616_p107020) | 14245..14949 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HTA80_RS00085 (D616_p107021) | 14999..15718 | + | 720 | Protein_16 | helicase RepA family protein | - |
| HTA80_RS00090 (D616_p107022) | 15705..16556 | + | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| HTA80_RS00095 (D616_p107023) | 16864..17679 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| HTA80_RS00100 (D616_p107024) | 17784..18542 | + | 759 | WP_001145207.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HTA80_RS00105 (D616_p107025) | 18542..19378 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| HTA80_RS00110 (D616_p107026) | 19439..20143 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HTA80_RS00115 (D616_p107027) | 20294..21109 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HTA80_RS00120 (D616_p107028) | 21299..22003 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HTA80_RS00125 (D616_p107029) | 22068..23318 | - | 1251 | Protein_24 | transposase | - |
| HTA80_RS00130 (D616_p107030) | 23393..24061 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| HTA80_RS00135 (D616_p107031) | 24097..24333 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| HTA80_RS00140 (D616_p107032) | 24330..24692 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| HTA80_RS00145 (D616_p107033) | 24710..26404 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| HTA80_RS00150 (D616_p107034) | 26456..26878 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| HTA80_RS00155 (D616_p107035) | 26914..27189 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| HTA80_RS00160 (D616_p107036) | 27203..27553 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| HTA80_RS00165 (D616_p107037) | 27625..28059 | + | 435 | WP_023842309.1 | IS607 family transposase ISChh1 | Transposase |
| HTA80_RS00170 (D616_p107040) | 29062..29304 | + | 243 | WP_000844627.1 | transposase | - |
| HTA80_RS00175 (D616_p107041) | 29336..29986 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HTA80_RS00180 (D616_p107042) | 30092..31291 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| HTA80_RS00185 (D616_p107043) | 31323..32207 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| HTA80_RS00190 (D616_p107044) | 32345..32737 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| HTA80_RS00195 (D616_p107045) | 32741..34492 | + | 1752 | Protein_38 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HTA80_RS00205 (D616_p107047) | 34499..36232 | + | 1734 | WP_225379986.1 | colicin Ia central receptor-binding domain-containing protein | - |
| HTA80_RS00210 (D616_p107048) | 36250..36597 | - | 348 | WP_000762572.1 | colicin E1 family microcin immunity protein | - |
| HTA80_RS00215 | 36716..37063 | + | 348 | WP_000142445.1 | DUF6404 family protein | - |
| HTA80_RS00220 (D616_p107049) | 37083..37268 | - | 186 | Protein_42 | hypothetical protein | - |
| HTA80_RS00225 (D616_p107050) | 37667..37969 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| HTA80_RS00230 (D616_p107051) | 37966..38592 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| HTA80_RS00235 (D616_p107052) | 38796..40067 | - | 1272 | WP_000457473.1 | Y-family DNA polymerase | - |
| HTA80_RS00240 (D616_p107053) | 40067..40504 | - | 438 | WP_000109077.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HTA80_RS00245 (D616_p107054) | 40501..40749 | - | 249 | WP_000619113.1 | DinI-like family protein | - |
| HTA80_RS00250 (D616_p107055) | 41772..43496 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| HTA80_RS00255 (D616_p107056) | 43573..44475 | + | 903 | WP_023842311.1 | DUF1281 domain-containing protein | - |
| HTA80_RS00260 | 44472..44783 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| HTA80_RS00265 (D616_p107058) | 44860..45543 | + | 684 | WP_000086152.1 | DNA methylase | - |
| HTA80_RS00270 (D616_p107059) | 45544..45765 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| HTA80_RS00275 (D616_p107060) | 45779..46213 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| HTA80_RS00280 (D616_p107061) | 46259..47035 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| HTA80_RS00285 (D616_p107063) | 47453..47878 | + | 426 | WP_001198938.1 | antirestriction protein | - |
| HTA80_RS00290 (D616_p107064) | 47925..48344 | + | 420 | WP_000271736.1 | DUF1380 family protein | - |
| HTA80_RS00295 | 48344..48535 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| HTA80_RS00300 (D616_p107067) | 49284..50132 | + | 849 | WP_001077046.1 | DUF4942 domain-containing protein | - |
| HTA80_RS00305 (D616_p107068) | 50217..50552 | - | 336 | WP_000157096.1 | hypothetical protein | - |
| HTA80_RS00310 (D616_p107069) | 50785..51117 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| HTA80_RS00315 (D616_p107070) | 51129..53840 | + | 2712 | WP_000991386.1 | hypothetical protein | Relaxase |
| HTA80_RS00320 (D616_p107071) | 53908..54339 | + | 432 | WP_001335086.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| HTA80_RS00325 (D616_p107072) | 54437..54667 | - | 231 | WP_071985462.1 | hypothetical protein | - |
| HTA80_RS00330 (D616_p107074) | 55134..57437 | - | 2304 | WP_000077652.1 | F-type conjugative transfer protein TrbC | - |
| HTA80_RS00335 (D616_p107075) | 57418..58536 | - | 1119 | WP_000155611.1 | DsbC family protein | - |
| HTA80_RS00340 (D616_p107076) | 58533..59822 | - | 1290 | WP_000121923.1 | IncI1-type conjugal transfer protein TrbA | - |
| HTA80_RS00655 | 60320..60415 | + | 96 | WP_000609151.1 | DinQ-like type I toxin DqlB | - |
| HTA80_RS00350 (D616_p107078) | 60558..60830 | - | 273 | WP_235674055.1 | flagellar biosynthesis protein FlgM | - |
| HTA80_RS00355 (D616_p107079) | 60897..61088 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| HTA80_RS00360 | 61101..61463 | - | 363 | WP_000997721.1 | hypothetical protein | - |
| HTA80_RS00365 | 61597..61806 | + | 210 | WP_050561356.1 | hypothetical protein | - |
| HTA80_RS00370 (D616_p107081) | 61969..66060 | - | 4092 | WP_075051281.1 | Serine protease SepA autotransporter | VF |
| HTA80_RS00375 (D616_p107082) | 66462..66929 | - | 468 | WP_000598959.1 | thermonuclease family protein | - |
| HTA80_RS00380 (D616_p107083) | 67088..67711 | + | 624 | WP_001158020.1 | hypothetical protein | - |
| HTA80_RS00385 (D616_p107084) | 67799..68254 | + | 456 | WP_001205146.1 | DUF2569 family protein | - |
| HTA80_RS00390 (D616_p107085) | 68454..69989 | + | 1536 | WP_001317519.1 | phosphoethanolamine transferase | - |
| HTA80_RS00395 (D616_p107086) | 70082..70444 | - | 363 | WP_000551913.1 | hypothetical protein | - |
| HTA80_RS00400 (D616_p107087) | 70656..70808 | + | 153 | WP_001444391.1 | Hok/Gef family protein | - |
| HTA80_RS00635 | 70880..70966 | - | 87 | Protein_79 | antitoxin | - |
| HTA80_RS00640 | 71123..71254 | - | 132 | Protein_80 | ethanolamine utilization protein EutE | - |
| HTA80_RS00410 (D616_p107090) | 71362..71565 | + | 204 | WP_181041355.1 | HEAT repeat domain-containing protein | - |
| HTA80_RS00415 (D616_p107091) | 71630..72274 | - | 645 | WP_001005412.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HTA80_RS00420 (D616_p107092) | 72361..74526 | - | 2166 | WP_000691803.1 | DotA/TraY family protein | - |
| HTA80_RS00425 | 74599..75168 | - | 570 | WP_181411561.1 | conjugal transfer protein TraX | - |
| HTA80_RS00430 (D616_p107093) | 75165..76370 | - | 1206 | WP_001189542.1 | conjugal transfer protein TraW | - |
| HTA80_RS00435 (D616_p107094) | 76328..76948 | - | 621 | WP_000286859.1 | hypothetical protein | - |
| HTA80_RS00440 (D616_p107095) | 76948..79992 | - | 3045 | WP_001024762.1 | hypothetical protein | - |
| HTA80_RS00445 | 80217..80762 | + | 546 | WP_001369268.1 | hypothetical protein | - |
| HTA80_RS00450 (D616_p107097) | 80735..81115 | - | 381 | WP_000690882.1 | hypothetical protein | - |
| HTA80_RS00455 (D616_p107098) | 81115..81474 | - | 360 | WP_000379509.1 | hypothetical protein | - |
| HTA80_RS00460 (D616_p107099) | 81533..82351 | - | 819 | WP_072112391.1 | conjugal transfer protein TraT | - |
| HTA80_RS00660 | 82266..82517 | - | 252 | WP_001277575.1 | hypothetical protein | - |
| HTA80_RS00470 (D616_p107101) | 82574..82972 | - | 399 | WP_000086067.1 | hypothetical protein | - |
| HTA80_RS00475 (D616_p107102) | 83021..83551 | - | 531 | WP_000987022.1 | conjugal transfer protein TraQ | - |
| HTA80_RS00480 (D616_p107103) | 83548..84261 | - | 714 | WP_000787008.1 | conjugal transfer protein TraP | - |
| HTA80_RS00485 (D616_p107104) | 84258..85589 | - | 1332 | WP_001272016.1 | conjugal transfer protein TraO | - |
| HTA80_RS00490 (D616_p107105) | 85593..86567 | - | 975 | WP_001165564.1 | hypothetical protein | VF |
| HTA80_RS00495 (D616_p107106) | 86578..87273 | - | 696 | WP_001287263.1 | DotI/IcmL family type IV secretion protein | - |
| HTA80_RS00500 (D616_p107107) | 87285..87635 | - | 351 | WP_001056369.1 | hypothetical protein | - |
| HTA80_RS00505 (D616_p107108) | 87652..91668 | - | 4017 | WP_000842446.1 | LPD7 domain-containing protein | - |
| HTA80_RS00650 | 91732..92022 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| HTA80_RS00510 (D616_p107110) | 92019..93167 | - | 1149 | WP_000625246.1 | putative protein YggR | VF |
| HTA80_RS00515 (D616_p107111) | 93151..93987 | - | 837 | WP_000848138.1 | hypothetical protein | VF |
| HTA80_RS00520 (D616_p107112) | 93984..94436 | - | 453 | WP_001081198.1 | DotD/TraH family lipoprotein | - |
| HTA80_RS00525 (D616_p107113) | 94795..95997 | - | 1203 | WP_000980149.1 | conjugal transfer protein TraF | - |
| HTA80_RS00530 (D616_p107114) | 96086..96907 | - | 822 | WP_000804092.1 | hypothetical protein | - |
| HTA80_RS00535 (D616_p107115) | 97167..97487 | + | 321 | WP_000695055.1 | hypothetical protein | - |
| HTA80_RS00540 (D616_p107116) | 97578..97868 | - | 291 | WP_000681898.1 | hypothetical protein | - |
| HTA80_RS00545 (D616_p107117) | 97910..99079 | - | 1170 | WP_000486830.1 | site-specific integrase | - |
| HTA80_RS00550 (D616_p107118) | 99693..101057 | - | 1365 | WP_001168069.1 | hypothetical protein | VF |
| HTA80_RS00555 (D616_p107119) | 101062..101697 | - | 636 | WP_000478594.1 | prepilin peptidase | - |
| HTA80_RS00560 (D616_p107120) | 101716..102189 | - | 474 | WP_000870986.1 | hypothetical protein | VF |
| HTA80_RS00565 (D616_p107121) | 102243..102779 | - | 537 | WP_001011158.1 | type 4 pilus major pilin | - |
| HTA80_RS00570 (D616_p107122) | 102853..103953 | - | 1101 | WP_000670138.1 | hypothetical protein | VF |
| HTA80_RS00575 (D616_p107123) | 103955..105463 | - | 1509 | WP_000886636.1 | hypothetical protein | VF |
| HTA80_RS00580 (D616_p107124) | 105548..106000 | - | 453 | WP_001112925.1 | type IV pilus biogenesis protein PilP | - |
| HTA80_RS00585 (D616_p107125) | 105990..107285 | - | 1296 | WP_000129891.1 | type 4b pilus protein PilO2 | - |
| HTA80_RS00590 (D616_p107126) | 107306..108925 | - | 1620 | WP_001034998.1 | Outer membrane lipoprotein BfpB | VF |
| HTA80_RS00595 (D616_p107127) | 108956..109393 | - | 438 | WP_000539685.1 | type IV pilus biogenesis protein PilM | - |
| HTA80_RS00600 (D616_p107128) | 109398..110465 | - | 1068 | WP_001170195.1 | hypothetical protein | VF |
| HTA80_RS00605 (D616_p107129) | 110622..110957 | - | 336 | WP_024186155.1 | hypothetical protein | - |
| HTA80_RS00610 (D616_p107130) | 111074..111316 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| HTA80_RS00615 (D616_p107131) | 111397..113091 | - | 1695 | WP_000482663.1 | flotillin family protein | - |
| HTA80_RS00620 (D616_p107132) | 113118..113738 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| HTA80_RS00625 (D616_p107133) | 114005..114670 | - | 666 | WP_000154143.1 | hypothetical protein | - |
| HTA80_RS00630 (D616_p107134) | 114811..115317 | - | 507 | WP_001317510.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA6131 | NC_022996 | 1..124908 | 0.002 | |
| Escherichia coli strain E2863 | Conjugative plasmid | TA32350 | NZ_AP018803 | 1..124261 | 0.009 | |
| Escherichia coli O111:H- strain 110512 | Conjugative plasmid | TA33035 | NZ_AP019762 | 1..118827 | 0.009 | |
| Escherichia coli strain 2009C-3133 | Conjugative plasmid | TA57718 | NZ_CP013024 | 1..120611 | 0.008 | |
| Escherichia coli strain 97-3250 | Conjugative plasmid | TA99741 | NZ_CP027600 | 1..120604 | 0.008 | |
| Escherichia coli | Conjugative plasmid | TA6131 | NC_022996 | 1..124908 | 0.002 |