MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 71173 bp
Accession: NC_017578 Location: 1..71173 Organism: Shewanella baltica OS117 Replicon: plasmid pSBAL11703
Accession: NC_017578 Location: 1..71173 Organism: Shewanella baltica OS117 Replicon: plasmid pSBAL11703
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SBAL117_RS24215 () | 74..292 | + | 219 | WP_014620439.1 | TraY domain-containing protein | - |
| SBAL117_RS24220 () | 261..851 | - | 591 | WP_011839983.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| SBAL117_RS24225 () | 1012..3996 | + | 2985 | WP_011846847.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| SBAL117_RS24230 () | 4491..4829 | - | 339 | WP_011839985.1 | hypothetical protein | - |
| SBAL117_RS24235 () | 4925..5245 | - | 321 | WP_014620440.1 | hypothetical protein | - |
| SBAL117_RS24240 () | 5326..5712 | - | 387 | WP_011839986.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| SBAL117_RS24245 () | 5712..5882 | - | 171 | WP_011839987.1 | hypothetical protein | Antitoxin Detail |
| SBAL117_RS24250 () | 6016..6447 | - | 432 | WP_011839988.1 | DUF3577 domain-containing protein | - |
| SBAL117_RS24255 () | 6752..8875 | - | 2124 | WP_014620441.1 | DNA topoisomerase III | - |
| SBAL117_RS24260 () | 8885..9196 | - | 312 | WP_011839990.1 | hypothetical protein | - |
| SBAL117_RS24265 () | 9199..9648 | - | 450 | WP_011839991.1 | single-stranded DNA-binding protein | - |
| SBAL117_RS24270 () | 9697..10197 | - | 501 | WP_011839992.1 | hypothetical protein | - |
| SBAL117_RS24275 () | 10405..10881 | + | 477 | WP_011839993.1 | DUF417 family protein | - |
| SBAL117_RS24280 () | 10979..11560 | - | 582 | WP_011839994.1 | DUF2913 family protein | - |
| SBAL117_RS24285 () | 11557..11835 | - | 279 | WP_011839995.1 | hypothetical protein | - |
| SBAL117_RS25265 () | 12394..12693 | + | 300 | WP_014620443.1 | hypothetical protein | - |
| SBAL117_RS24305 () | 12653..13582 | + | 930 | WP_014620444.1 | integrase | - |
| SBAL117_RS24310 () | 14134..14409 | - | 276 | WP_148258346.1 | hypothetical protein | - |
| SBAL117_RS24315 () | 14424..14678 | - | 255 | WP_011839997.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| SBAL117_RS24320 () | 14675..14926 | - | 252 | WP_011839998.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SBAL117_RS24325 () | 15190..15639 | + | 450 | WP_011839999.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SBAL117_RS24330 () | 15639..16208 | + | 570 | WP_011840000.1 | PIN domain-containing protein | Toxin Detail |
| SBAL117_RS24335 () | 16271..17476 | - | 1206 | WP_014620445.1 | IS256 family transposase ISSod5 | Transposase |
| SBAL117_RS24340 () | 17697..20696 | - | 3000 | WP_014620446.1 | hypothetical protein | - |
| SBAL117_RS24345 () | 20977..21483 | + | 507 | Protein_24 | IS5 family transposase ISSod12 | Transposase |
| SBAL117_RS24350 () | 21550..22296 | - | 747 | WP_011839978.1 | IS21 family transposase ISSba11 | Transposase |
| SBAL117_RS24355 () | 22286..23083 | - | 798 | Protein_26 | IS21 family transposase ISSba11 | Transposase |
| SBAL117_RS24365 () | 23148..24703 | + | 1556 | WP_086011359.1 | IS3 family transposase ISSba13 | Transposase |
| SBAL117_RS24370 () | 24743..25462 | - | 720 | Protein_28 | IS21 family transposase ISSba11 | Transposase |
| SBAL117_RS24375 () | 25555..25974 | + | 420 | Protein_29 | IS5 family transposase ISSod12 | Transposase |
| SBAL117_RS24380 () | 26045..26965 | - | 921 | WP_011840009.1 | LysR family transcriptional regulator | - |
| SBAL117_RS25270 () | 27410..28321 | + | 912 | Protein_31 | IS3 family transposase | - |
| SBAL117_RS24405 () | 29561..29812 | + | 252 | Protein_33 | IS3 family transposase ISSod1 | Transposase |
| SBAL117_RS25275 () | 29748..30056 | - | 309 | Protein_34 | recombinase family protein | - |
| SBAL117_RS24410 () | 30760..31083 | + | 324 | WP_011840013.1 | hypothetical protein | - |
| SBAL117_RS24415 () | 31126..31761 | + | 636 | WP_011840014.1 | hypothetical protein | VF |
| SBAL117_RS24420 () | 32025..32636 | + | 612 | WP_014620447.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| SBAL117_RS24425 () | 32854..33264 | + | 411 | WP_006087348.1 | hypothetical protein | Antitoxin Detail |
| SBAL117_RS24430 () | 33261..34202 | + | 942 | WP_014620448.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| SBAL117_RS24435 () | 34210..36801 | + | 2592 | WP_014620449.1 | type I restriction-modification system subunit M | - |
| SBAL117_RS25280 () | 36803..37969 | + | 1167 | WP_014620450.1 | restriction endonuclease subunit S | - |
| SBAL117_RS24445 () | 37983..41168 | + | 3186 | WP_014620451.1 | type I restriction endonuclease subunit R | - |
| SBAL117_RS24450 () | 41471..41815 | - | 345 | WP_011839953.1 | IS4 family transposase ISAeme22 | Transposase |
| SBAL117_RS24455 () | 41864..42181 | - | 318 | WP_011839954.1 | recombination regulator RecX | - |
| SBAL117_RS24460 () | 42178..43563 | - | 1386 | WP_011839955.1 | hypothetical protein | - |
| SBAL117_RS24470 () | 44217..44606 | - | 390 | WP_011839956.1 | hypothetical protein | - |
| SBAL117_RS24475 () | 44599..44865 | - | 267 | WP_011839957.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SBAL117_RS24480 () | 44849..45073 | - | 225 | WP_011839958.1 | TraY domain-containing protein | Antitoxin Detail |
| SBAL117_RS25285 () | 45151..45378 | + | 228 | Protein_49 | IS30 family transposase | - |
| SBAL117_RS24490 () | 45594..45785 | + | 192 | WP_014620453.1 | hypothetical protein | - |
| SBAL117_RS25680 () | 46114..46311 | - | 198 | WP_014620454.1 | hypothetical protein | - |
| SBAL117_RS24500 () | 46308..46934 | - | 627 | WP_011839960.1 | hypothetical protein | - |
| SBAL117_RS25290 () | 47486..47854 | - | 369 | WP_011839961.1 | hypothetical protein | - |
| SBAL117_RS24505 () | 47882..49186 | + | 1305 | WP_011839962.1 | RNA-directed DNA polymerase | - |
| SBAL117_RS24510 () | 49487..49822 | - | 336 | WP_190272054.1 | hypothetical protein | - |
| SBAL117_RS24515 () | 50059..53487 | - | 3429 | WP_014620456.1 | Ig-like domain-containing protein | - |
| SBAL117_RS24520 () | 53484..54485 | - | 1002 | WP_011839965.1 | OmpA family protein | - |
| SBAL117_RS25875 () | 54576..54723 | + | 148 | Protein_58 | IS6 family transposase | - |
| SBAL117_RS24525 () | 55162..55803 | + | 642 | WP_011839967.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| SBAL117_RS24530 () | 55855..56505 | - | 651 | WP_011839968.1 | Abi family protein | - |
| SBAL117_RS24540 () | 56982..57173 | + | 192 | WP_014620457.1 | hypothetical protein | - |
| SBAL117_RS25745 () | 57502..57699 | - | 198 | WP_014620459.1 | hypothetical protein | - |
| SBAL117_RS24550 () | 57696..58322 | - | 627 | WP_011839971.1 | hypothetical protein | - |
| SBAL117_RS24555 () | 58337..58600 | - | 264 | WP_011839972.1 | hypothetical protein | - |
| SBAL117_RS24560 () | 58637..59536 | - | 900 | WP_014620460.1 | hypothetical protein | - |
| SBAL117_RS24565 () | 60102..60833 | - | 732 | WP_011839974.1 | hypothetical protein | - |
| SBAL117_RS24570 () | 60842..61486 | - | 645 | WP_014620461.1 | TIGR03761 family integrating conjugative element protein | - |
| SBAL117_RS24575 () | 61473..62000 | - | 528 | WP_014620462.1 | DUF2857 family protein | - |
| SBAL117_RS24580 () | 62000..62926 | - | 927 | Protein_69 | hypothetical protein | Relaxase |
| SBAL117_RS24585 () | 63021..64523 | + | 1503 | WP_011839977.1 | IS21 family transposase ISSba11 | Transposase |
| SBAL117_RS24590 () | 64513..65259 | + | 747 | WP_011839978.1 | IS21 family transposase ISSba11 | Transposase |
| SBAL117_RS25300 () | 65284..65562 | + | 279 | WP_080514436.1 | Tn3 family transposase | - |
| SBAL117_RS24595 () | 65848..66207 | - | 360 | WP_014620463.1 | hypothetical protein | - |
| SBAL117_RS24600 () | 67123..67692 | + | 570 | WP_011839979.1 | Chromosome partitioning protein ParA | VF |
| SBAL117_RS24605 () | 67689..68054 | + | 366 | WP_011839980.1 | hypothetical protein | - |
| SBAL117_RS24615 () | 68355..68510 | - | 156 | WP_012592954.1 | Hok/Gef family protein | - |
| SBAL117_RS24620 () | 69256..69990 | - | 735 | WP_011839981.1 | hypothetical protein | - |
| SBAL117_RS24630 () | 70450..71091 | - | 642 | WP_011839982.1 | LexA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|