MGE detailed information
MGE type: Genomic_island MGE length: 21359 bp
Accession: NC_011593 Location: 1555544..1576902 Organism: Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 Replicon: chromosome
Accession: NC_011593 Location: 1555544..1576902 Organism: Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLON_RS07200 (Blon_1384) | 1551457..1551798 | + | 342 | WP_012577722.1 | hypothetical protein | - |
| BLON_RS14310 | 1552101..1552430 | + | 330 | WP_126386323.1 | hypothetical protein | - |
| BLON_RS07210 (Blon_1386) | 1552744..1553949 | + | 1206 | WP_113738609.1 | MFS transporter | - |
| BLON_RS13620 (Blon_1387) | 1554081..1555118 | + | 1038 | WP_012577725.1 | tRNA pseudouridine(13) synthase TruD | - |
| BLON_RS13625 (Blon_1388) | 1555186..1555665 | + | 480 | WP_158309820.1 | transposase | - |
| BLON_RS07220 (Blon_1389) | 1555678..1555998 | - | 321 | WP_012577727.1 | hypothetical protein | - |
| BLON_RS07225 (Blon_1390) | 1556407..1557213 | - | 807 | WP_011068121.1 | Abi family protein | - |
| BLON_RS14515 | 1557376..1557630 | - | 255 | WP_003829406.1 | hypothetical protein | - |
| BLON_RS14315 | 1558529..1558738 | + | 210 | WP_143247670.1 | hypothetical protein | - |
| BLON_RS07235 (Blon_1392) | 1559139..1560134 | - | 996 | WP_012577729.1 | histidine kinase | - |
| BLON_RS07240 (Blon_1393) | 1560279..1560973 | - | 695 | Protein_1415 | response regulator transcription factor | - |
| BLON_RS07245 (Blon_1394) | 1561099..1561614 | + | 516 | WP_013140733.1 | hypothetical protein | - |
| BLON_RS07250 (Blon_1395) | 1561611..1562501 | + | 891 | WP_014484913.1 | hypothetical protein | - |
| BLON_RS07255 (Blon_1396) | 1562498..1563178 | + | 681 | WP_003829413.1 | putative ABC transporter ATP-binding protein YknY | VF |
| BLON_RS07260 (Blon_1397) | 1563175..1564344 | + | 1170 | WP_012577732.1 | ABC transporter permease | - |
| BLON_RS07265 (Blon_1398) | 1564529..1564798 | + | 270 | WP_014484914.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BLON_RS07270 (Blon_1399) | 1564802..1565095 | + | 294 | WP_003831807.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| BLON_RS13660 | 1565153..1565433 | + | 281 | Protein_1422 | hypothetical protein | - |
| BLON_RS07280 (Blon_1401) | 1565764..1566315 | + | 552 | WP_012577735.1 | RNA polymerase sigma-H factor | VF |
| BLON_RS07285 (Blon_1402) | 1566349..1567176 | + | 828 | WP_012577736.1 | hypothetical protein | - |
| BLON_RS07290 (Blon_1403) | 1567308..1567934 | + | 627 | WP_012577737.1 | hypothetical protein | - |
| BLON_RS07295 (Blon_1404) | 1567931..1568713 | + | 783 | WP_012577738.1 | hypothetical protein | - |
| BLON_RS07300 (Blon_1405) | 1568766..1569641 | + | 876 | WP_003829425.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| BLON_RS07305 (Blon_1406) | 1569695..1570093 | + | 399 | WP_003829426.1 | superoxide dismutase | - |
| BLON_RS07310 (Blon_1407) | 1570188..1570550 | - | 363 | WP_003829427.1 | hypothetical protein | - |
| BLON_RS07315 (Blon_1408) | 1570674..1571549 | - | 876 | WP_014484916.1 | EamA family transporter | - |
| BLON_RS07320 (Blon_1409) | 1571753..1572376 | - | 624 | WP_012577740.1 | hypothetical protein | - |
| BLON_RS07325 (Blon_1410) | 1572373..1573101 | - | 729 | WP_012577741.1 | hypothetical protein | - |
| BLON_RS07330 (Blon_1411) | 1573106..1573762 | - | 657 | WP_003829431.1 | ATP-binding cassette domain-containing protein | - |
| BLON_RS07335 (Blon_1412) | 1574278..1575477 | + | 1200 | WP_007056219.1 | IS110 family transposase ISSer1 | Transposase |
| BLON_RS07340 (Blon_1413) | 1575669..1576902 | + | 1234 | Protein_1435 | IS30 family transposase | - |
| BLON_RS07345 (Blon_1414) | 1577091..1577759 | - | 669 | WP_012577742.1 | response regulator transcription factor | - |
| BLON_RS07350 (Blon_1415) | 1577756..1578985 | - | 1230 | WP_003829436.1 | two-component sensor histidine kinase | - |
| BLON_RS07355 (Blon_1416) | 1579018..1580442 | - | 1425 | WP_012577744.1 | FtsX-like permease family protein | - |
| BLON_RS07360 (Blon_1417) | 1580435..1581337 | - | 903 | WP_012577745.1 | ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM | Genomic island | TA26378 | NC_017219 | 1555334..1576692 | 0 | |
| Bifidobacterium longum subsp. infantis strain NCTC11817 | Genomic island | TA287797 | NZ_LR134354 | 1555338..1576696 | 0 | |
| Bifidobacterium longum subsp. infantis isolate B.longum_ssp_infantis_6 | Genomic island | TA288655 | NZ_LR655210 | 1507377..1535379 | 0.007 | |
| Bifidobacterium longum isolate MGYG-HGUT-01292 | Genomic island | TA288685 | NZ_LR698953 | 1555544..1576902 | 0 |