MGE detailed information
MGE type: Prophage MGE length: 42345 bp
Accession: NC_009641 Location: 320846..363190 Organism: Staphylococcus aureus subsp. aureus str. Newman Replicon: chromosome
Accession: NC_009641 Location: 320846..363190 Organism: Staphylococcus aureus subsp. aureus str. Newman Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NWMN_RS01435 (NWMN_0260) | 316295..316963 | + | 669 | WP_000936720.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| NWMN_RS01440 (NWMN_0261) | 317090..318403 | - | 1314 | WP_001077722.1 | YjiH family protein | - |
| NWMN_RS01445 (NWMN_0262) | 318821..320752 | + | 1932 | Protein_279 | YSIRK domain-containing triacylglycerol lipase Lip2/Geh | - |
| NWMN_RS01450 (NWMN_0263) | 320846..322051 | - | 1206 | WP_000264186.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NWMN_RS01455 | 322162..322341 | + | 180 | WP_000337827.1 | hypothetical protein | - |
| NWMN_RS01460 (NWMN_0264) | 322321..323253 | - | 933 | WP_000392183.1 | hypothetical protein | - |
| NWMN_RS01465 (NWMN_0265) | 323285..323749 | - | 465 | WP_000525007.1 | hypothetical protein | Toxin Detail |
| NWMN_RS01470 | 323762..324076 | - | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| NWMN_RS01475 | 324228..324464 | + | 237 | WP_001121116.1 | helix-turn-helix domain-containing protein | - |
| NWMN_RS01480 | 324478..324657 | + | 180 | WP_000438352.1 | hypothetical protein | - |
| NWMN_RS01485 (NWMN_0267) | 324758..325240 | - | 483 | WP_000394410.1 | hypothetical protein | - |
| NWMN_RS01490 (NWMN_0268) | 325300..326049 | + | 750 | WP_001148586.1 | phage antirepressor KilAC domain-containing protein | - |
| NWMN_RS01495 | 326065..326283 | + | 219 | WP_000993180.1 | hypothetical protein | - |
| NWMN_RS01500 (NWMN_0269) | 326313..326576 | + | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| NWMN_RS01505 | 326588..326749 | + | 162 | WP_000066021.1 | DUF1270 family protein | - |
| NWMN_RS01510 (NWMN_0270) | 326841..327101 | + | 261 | WP_000291089.1 | DUF1108 family protein | - |
| NWMN_RS01515 (NWMN_2615) | 327111..327332 | + | 222 | WP_000815401.1 | DUF2483 family protein | - |
| NWMN_RS01520 (NWMN_0271) | 327325..328113 | + | 789 | WP_000134097.1 | ATP-binding protein | - |
| NWMN_RS01525 (NWMN_0272) | 328142..328693 | + | 552 | WP_000704705.1 | single-stranded DNA-binding protein | - |
| NWMN_RS01530 (NWMN_0273) | 328706..329377 | + | 672 | WP_001199439.1 | hypothetical protein | - |
| NWMN_RS01535 (NWMN_0274) | 329483..330340 | - | 858 | WP_000371250.1 | DUF4393 domain-containing protein | - |
| NWMN_RS01540 (NWMN_0275) | 330405..331175 | + | 771 | WP_000190223.1 | conserved phage C-terminal domain-containing protein | - |
| NWMN_RS01545 (NWMN_0276) | 331185..331964 | + | 780 | WP_000803062.1 | ATP-binding protein | - |
| NWMN_RS01550 | 331958..332116 | + | 159 | WP_000256597.1 | hypothetical protein | - |
| NWMN_RS01555 | 332129..332350 | + | 222 | WP_001123684.1 | DUF3269 family protein | - |
| NWMN_RS01560 (NWMN_0277) | 332360..332767 | + | 408 | WP_000401950.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NWMN_RS01565 | 332767..332952 | + | 186 | WP_001187264.1 | DUF3113 family protein | - |
| NWMN_RS01570 (NWMN_0278) | 332953..333312 | + | 360 | WP_000117792.1 | hypothetical protein | - |
| NWMN_RS01575 (NWMN_0279) | 333312..333566 | + | 255 | WP_000022735.1 | DUF3310 domain-containing protein | - |
| NWMN_RS01580 (NWMN_0280) | 333566..333814 | + | 249 | WP_012068339.1 | hypothetical protein | - |
| NWMN_RS01585 (NWMN_0281) | 333829..334230 | + | 402 | WP_000695747.1 | hypothetical protein | - |
| NWMN_RS01595 (NWMN_0282) | 334418..334867 | + | 450 | WP_000982708.1 | hypothetical protein | - |
| NWMN_RS01600 (NWMN_0283) | 334864..335148 | + | 285 | WP_001105621.1 | hypothetical protein | - |
| NWMN_RS01605 | 335141..335389 | + | 249 | WP_001065083.1 | DUF1024 family protein | - |
| NWMN_RS01610 (NWMN_0284) | 335382..335918 | + | 537 | WP_000185669.1 | dUTP diphosphatase | - |
| NWMN_RS01615 | 335955..336161 | + | 207 | WP_000195799.1 | DUF1381 domain-containing protein | - |
| NWMN_RS01620 | 336158..336352 | + | 195 | WP_000132919.1 | hypothetical protein | - |
| NWMN_RS01625 | 336349..336552 | + | 204 | WP_001072795.1 | hypothetical protein | - |
| NWMN_RS01630 (NWMN_0285) | 336545..336781 | + | 237 | WP_000608279.1 | hypothetical protein | - |
| NWMN_RS01635 (NWMN_0286) | 336771..337160 | + | 390 | WP_001580341.1 | hypothetical protein | - |
| NWMN_RS01640 | 337157..337330 | + | 174 | WP_000595257.1 | transcriptional activator RinB | - |
| NWMN_RS01645 (NWMN_0287) | 337331..337732 | + | 402 | WP_000286968.1 | hypothetical protein | - |
| NWMN_RS01650 (NWMN_0288) | 338083..338577 | + | 495 | WP_000594088.1 | terminase small subunit | - |
| NWMN_RS01655 (NWMN_0289) | 338570..339793 | + | 1224 | WP_001037578.1 | PBSX family phage terminase large subunit | - |
| NWMN_RS01660 (NWMN_0290) | 339790..341214 | + | 1425 | WP_000177430.1 | phage portal protein | - |
| NWMN_RS01665 (NWMN_0291) | 341183..342136 | + | 954 | WP_000184135.1 | phage head morphogenesis protein | - |
| NWMN_RS01670 | 342138..342344 | + | 207 | WP_000346033.1 | hypothetical protein | - |
| NWMN_RS01675 (NWMN_0293) | 342447..343031 | + | 585 | WP_001019219.1 | DUF4355 domain-containing protein | - |
| NWMN_RS01680 (NWMN_0294) | 343048..343962 | + | 915 | WP_000235168.1 | phage major capsid protein | - |
| NWMN_RS15835 | 343974..344117 | + | 144 | WP_000002929.1 | hypothetical protein | - |
| NWMN_RS01685 (NWMN_0295) | 344123..344473 | + | 351 | WP_000177352.1 | hypothetical protein | - |
| NWMN_RS01690 (NWMN_0296) | 344485..344820 | + | 336 | WP_000483040.1 | phage head closure protein | - |
| NWMN_RS01695 (NWMN_0297) | 344807..345220 | + | 414 | WP_001151330.1 | HK97 gp10 family phage protein | - |
| NWMN_RS01700 (NWMN_0298) | 345233..345658 | + | 426 | WP_000270192.1 | DUF3168 domain-containing protein | - |
| NWMN_RS01705 (NWMN_0299) | 345659..346216 | + | 558 | WP_000057582.1 | tail protein | - |
| NWMN_RS01710 (NWMN_0300) | 346283..346789 | + | 507 | WP_000134337.1 | hypothetical protein | - |
| NWMN_RS01715 | 346834..347118 | + | 285 | WP_000880587.1 | hypothetical protein | - |
| NWMN_RS01720 (NWMN_0302) | 347122..350265 | + | 3144 | WP_000379457.1 | terminase | - |
| NWMN_RS01725 (NWMN_0303) | 350280..351221 | + | 942 | WP_000560181.1 | phage tail family protein | - |
| NWMN_RS01730 (NWMN_0304) | 351232..353118 | + | 1887 | WP_001122001.1 | phage tail protein | - |
| NWMN_RS01735 (NWMN_0305) | 353131..355029 | + | 1899 | WP_000323259.1 | hypothetical protein | - |
| NWMN_RS01740 (NWMN_0306) | 355029..356852 | + | 1824 | WP_000634521.1 | phage baseplate upper protein | - |
| NWMN_RS01745 (NWMN_0307) | 356852..357229 | + | 378 | WP_000705895.1 | DUF2977 domain-containing protein | - |
| NWMN_RS01750 | 357233..357406 | + | 174 | WP_000782200.1 | XkdX family protein | - |
| NWMN_RS01755 (NWMN_0308) | 357446..357745 | + | 300 | WP_000466778.1 | DUF2951 domain-containing protein | - |
| NWMN_RS01760 (NWMN_0309) | 357882..359780 | + | 1899 | WP_000524021.1 | hypothetical protein | VF |
| NWMN_RS01765 (NWMN_0310) | 359793..360965 | + | 1173 | WP_000276627.1 | BppU family phage baseplate upper protein | - |
| NWMN_RS01770 (NWMN_0311) | 360971..361366 | + | 396 | WP_000398878.1 | hypothetical protein | - |
| NWMN_RS01775 (NWMN_0312) | 361422..361724 | + | 303 | WP_000339146.1 | phage holin | - |
| NWMN_RS01780 (NWMN_0313) | 361736..363190 | + | 1455 | WP_000930256.1 | N-acetylmuramoyl-L-alanine amidase | - |
| NWMN_RS01790 (NWMN_0314) | 364324..365151 | - | 828 | WP_000136020.1 | alpha/beta hydrolase | - |
| NWMN_RS01795 (NWMN_0315) | 365224..366423 | - | 1200 | WP_000286484.1 | NADH-dependent flavin oxidoreductase | - |
| NWMN_RS01800 | 366519..366611 | + | 93 | WP_001801779.1 | hypothetical protein | - |
| NWMN_RS01805 (NWMN_0316) | 366725..367726 | + | 1002 | WP_000240058.1 | LLM class flavin-dependent oxidoreductase | - |
| NWMN_RS01810 (NWMN_0317) | 367760..368092 | + | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman strain NYU_Newman | Prophage | TA81165 | NZ_CP023390 | 316295..363190 | 0.002 | |
| Staphylococcus aureus strain Newman_D2C | Prophage | TA81183 | NZ_CP023391 | 320846..363190 | 0 | |
| Staphylococcus aureus strain Newman NM-CQ | Prophage | TA225603 | NZ_CP087593 | 320839..363160 | 0.003 | |
| Staphylococcus aureus strain ATCC 14458 | Prophage | TA270154 | NZ_CP117242 | 315773..362645 | 0.005 | |
| Staphylococcus aureus strain ATCC 14458 | Prophage | TA270154 | NZ_CP117242 | 320324..362645 | 0.003 | |
| Staphylococcus aureus isolate Sa_Newman_UoM | Prophage | TA293243 | NZ_LT598688 | 320839..363183 | 0 |