MGE detailed information
MGE type: IS/Tn MGE length: 1014 bp
Accession: NC_005126 Location: 5087822..5088835 Organism: Photorhabdus luminescens subsp. laumondii TTO1 Replicon: chromosome
Accession: NC_005126 Location: 5087822..5088835 Organism: Photorhabdus luminescens subsp. laumondii TTO1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PLU_RS21485 (plu4351) | 5084097..5085035 | - | 939 | WP_011148441.1 | pseudouridine-5'-phosphate glycosidase | - |
| PLU_RS21490 (plu4352) | 5085038..5086123 | - | 1086 | WP_011148442.1 | winged helix-turn-helix transcriptional regulator | - |
| PLU_RS21495 (plu4353) | 5086812..5086988 | + | 177 | WP_041381194.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PLU_RS21500 (plu4354) | 5087040..5087447 | + | 408 | WP_041380398.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PLU_RS21505 (plu4355) | 5087519..5087773 | - | 255 | WP_011148445.1 | cloacin immunity family protein | - |
| PLU_RS21510 (plu4356) | 5087822..5088835 | - | 1014 | WP_011148446.1 | IS630 family transposase ISPlu10 | Transposase |
| PLU_RS21515 (plu4357) | 5089228..5090427 | - | 1200 | WP_011148447.1 | aspartate/tyrosine/aromatic aminotransferase | - |
| PLU_RS21520 (plu4358) | 5090477..5091556 | - | 1080 | WP_011148448.1 | alanine racemase | - |
| PLU_RS21525 (plu4359) | 5091596..5093005 | - | 1410 | WP_011148449.1 | replicative DNA helicase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Photorhabdus laumondii subsp. laumondii strain DSPV002N | IS/Tn | TA62862 | NZ_CP015281 | 5087819..5088832 | 0 | |
| Photorhabdus laumondii subsp. laumondii strain DJC | IS/Tn | TA89188 | NZ_CP024900 | 4904554..4905567 | 0 | |
| Photorhabdus laumondii subsp. laumondii strain DJC | IS/Tn | TA89163, TA89164 | NZ_CP024900 | 986469..987482 | 0.003 | |
| Photorhabdus laumondii subsp. laumondii strain TT01 | IS/Tn | TA89223 | NZ_CP024901 | 5086523..5087536 | 0 |