The information of T4SS components from NC_012633 |
Region 1: 132408..149782 |
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# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
1 | RAF_ORF0122 | 127867..128163 [-], 297 | 229586337 | hypothetical protein | | |
2 | RAF_ORF0123 | 128471..128842 [-], 372 | 229586338 | hypothetical protein | | |
3 | RAF_ORF0124 (rpmB) | 129752..130045 [+], 294 | 229586339 | 50S ribosomal protein L28 | | |
4 | RAF_ORF0125 (rpmE) | 130042..130278 [+], 237 | 229586340 | 50S ribosomal protein L31 | | |
5 | RAF_ORF0126 (engB) | 130886..131524 [+], 639 | 229586341 | ribosome biogenesis GTP-binding protein YsxC | | |
6 | RAF_ORF0127 (argB) | 131472..132395 [+], 924 | 229586342 | Acetylglutamate kinase | | |
7 | RAF_ORF0128 (virB3) | 132408..132695 [+], 288 | 229586343 | type IV secretion system protein VirB3 | VirB3 | |
8 | RAF_ORF0129 (virB4-1) | 132785..135202 [+], 2418 | 229586344 | type IV secretion system ATPase VirB4 | VirB4 | |
9 | RAF_ORF0130 (virB6-1) | 135320..138439 [+], 3120 | 229586345 | VirB6 | VirB6 | |
10 | RAF_ORF0133 (virB6-3) | 140419..143319 [+], 2901 | 229586346 | VirB6 | VirB6 | |
11 | RAF_ORF0134 (virB6-4) | 143493..146168 [+], 2676 | 229586347 | VirB6 | VirB6 | |
12 | RAF_ORF0135 (virB6-5) | 146321..149782 [+], 3462 | 229586348 | VirB6 | VirB6 | |
13 | RAF_ORF0140 (trmD) | 153126..153830 [+], 705 | 229586349 | tRNA (guanine-N(1)-)-methyltransferase | | |
14 | RAF_ORF0141 (rplS) | 153848..154264 [+], 417 | 229586350 | 50S ribosomal protein L19 | | |
15 | RAF_ORF0142 | 154434..154670 [-], 237 | 229586351 | hypothetical protein | | |
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Region 2: 253513..253869 |
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# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
1 | RAF_ORF0227 | 249297..249644 [-], 348 | 229586431 | hypothetical protein | | |
2 | RAF_ORF0228 | 249813..250286 [+], 474 | 229586432 | hypothetical protein | | |
3 | RAF_ORF0229 (holA) | 250294..251268 [+], 975 | 229586433 | DNA polymerase III subunit delta | | |
4 | RAF_ORF0230 (coq7) | 251416..251955 [+], 540 | 229586434 | Ubiquinone biosynthesis protein coq7 | | |
5 | RAF_ORF0231 (coxC) | 252431..253357 [+], 927 | 229586435 | Cytochrome c oxidase subunit III | | |
6 | RAF_ORF0232 (virB2) | 253513..253869 [+], 357 | 229586436 | VirB2-like protein | VirB2 | |
7 | RAF_ORF0233 | 254213..254851 [-], 639 | 229586437 | hypothetical protein | | |
8 | RAF_ORF0234 (dapD) | 254927..255751 [+], 825 | 229586438 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase | | |
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Region 3: 386272..394168 |
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# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
1 | RAF_ORF0354 (vapB1) | 382476..382763 [-], 288 | 229586533 | Antitoxin of toxin-antitoxin (TA) system VapB | | |
2 | RAF_ORF0355 (nuoL2) | 382950..384413 [-], 1464 | 229586534 | putative monovalent cation/H+ antiporter subunit D | | |
3 | RAF_ORF0356 (nuoN2) | 384560..385861 [-], 1302 | 229586535 | putative monovalent cation/H+ antiporter subunit D | | |
4 | RAF_ORF0357 (mnhC) | 385858..386193 [-], 336 | 229586536 | putative monovalent cation/H+ antiporter subunit C | | |
5 | RAF_ORF0358 (virB9-1) | 386272..387024 [-], 753 | 229586537 | VirB9 | VirB9 | |
6 | RAF_ORF0359 (virB8-1) | 387026..387724 [-], 699 | 229586538 | virulence protein | VirB8 | |
7 | RAF_ORF0360 | 388185..388364 [+], 180 | 229586539 | hypothetical protein | | |
8 | RAF_ORF0361 (virB8-2) | 388414..389145 [+], 732 | 229586540 | virulence protein | VirB8 | |
9 | RAF_ORF0362 (virB9-2) | 389132..389605 [+], 474 | 229586541 | VirB9 | VirB9 | |
10 | RAF_ORF0363 (virB10) | 389789..391237 [+], 1449 | 229586542 | VirB10 | VirB10 | |
11 | RAF_ORF0364 (virB11) | 391234..392238 [+], 1005 | 229586543 | type IV secretion system ATPase VirB11 | VirB11 | |
12 | RAF_ORF0365 (virD4) | 392393..394168 [+], 1776 | 229586544 | type IV secretion system protein VirB8 | VirD4 | |
13 | RAF_ORF0366 (gppA) | 394170..395582 [+], 1413 | 229586545 | Guanosine pentaphosphate phosphohydrolase | | |
14 | RAF_ORF0367 | 395796..396197 [-], 402 | 229586546 | hypothetical protein | | |
15 | RAF_ORF0368 | 396235..396525 [-], 291 | 229586547 | hypothetical protein | | |
16 | RAF_ORF0369 | 396984..397364 [-], 381 | 229586548 | hypothetical protein | | |
17 | RAF_ORF0370 | 397587..397871 [+], 285 | 229586549 | Phage portal protein | | |
18 | RAF_ORF0371 | 398147..398272 [-], 126 | 229586550 | hypothetical protein | | |
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Region 4: 1127518..1129950 |
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# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
1 | RAF_ORF1106 (ampG3) | 1123450..1125096 [+], 1647 | 229587143 | AmpG protein | | |
2 | RAF_ORF1107 (tatC) | 1125163..1125918 [+], 756 | 229587144 | Sec-independent protein translocase protein TatC | | |
3 | RAF_ORF1108 (serS) | 1125896..1127173 [+], 1278 | 229587145 | seryl-tRNA synthetase | | |
4 | RAF_ORF1109 (virB4-2) | 1127518..1129950 [+], 2433 | 229587146 | VirB4 | VirB4 | |
5 | RAF_ORF1110 | 1130086..1133574 [+], 3489 | 229587147 | hypothetical protein | | |
6 | RAF_ORF1111 (terC) | 1133579..1134484 [+], 906 | 229587148 | Tellurium resistance protein TerC | | |
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