| Protein ID: 229586544 |
 T4SS name [ID] | VirB [480] |
| Gene symbol | virD4 |
| Locus tag | RAF_ORF0365 |
| Strain | Rickettsia africae ESF-5 |
| Replicon | chromosome [GenBank: NC_012633] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 392393..394168 [+] |
| Product | type IV secretion system protein VirB8 |
| Component type | VirD4 |
| UniProt ID | C3PMZ2 |
| KEGG ID | raf:RAF_ORF0365 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 1.4e-165, Aligned region: 120..567 TraG-D_C [PF12696], Evalue: 9e-28, Aligned region: 404..526 TrwB_AAD_bind [PF10412], Evalue: 1.3e-21, Aligned region: 237..535 AAA_10 [PF12846], Evalue: 2.6e-05, Aligned region: 155..481 |
| Protein Sequence: 591 a.a. [Download] |
| >gi|229586544|ref|YP_002845045.1| type IV secretion system protein VirB8 [Rickettsia africae ESF-5] MEWHKILKVTRNIFGHAIIHPVVIFCTIWISGAFVAIFTNEVGALGVNINAINIAYKWAYWLINVWGQLK ITDYNYLKLKLLASLLSPVIIVIIFYIKNFERIKSLQFFKQDEKVYGDASWANPSDIEAAGLRSKKGMLI GVDAGGYFVADGFQHALLFAPTGSGKGVGFVIPNLLFWSDSVVVHDIKLENHGLTSGWREKQGQKVFVWE PSNPDGVTHCYNPIDWVSTKPGQMVDDVQKISNLIMPEKDFWNNEARSLFLGVTLYLIADPTKTKSFGEV VRTMRSDDVVYNLAVVLDTLGGVIHPVAYMNIAAFLQKADKERSGVISTMNSSLELWANPLIDSATASSD FNIQEFKKVKTTVYVGLTPDNIQRLQKLMQVFYQQATEFLSRKMPDLKEEPYGVMFLLDEFPTLGKMDTF KAGIAYFRGYRVRLFLIIQDTQQLKGTYEDAGMNSFLSNATYRITFAANNYETANLISQLVGNKTVEQRS FSKPLFFDLNIATRTQNVSQVQRALLLPQEVIQLPRDEQIVLIESFPPIKSRKIKYYEDKFFTSRLLPPT FVPTQVPFDPRANNNGASEETETITVPENNE |
| Nucleotide Sequence: 1776 bp [Download] |
| >gi|229586230|ref|NC_012633.1|:392393-394168 Rickettsia africae ESF-5 chromosome, complete genome ATGGAATGGCATAAGATACTTAAAGTTACTAGAAATATATTCGGTCATGCTATAATTCATCCGGTTGTTA TTTTTTGTACCATTTGGATAAGCGGTGCATTTGTTGCAATTTTTACTAATGAGGTTGGAGCTTTAGGTGT AAATATAAATGCTATAAATATTGCTTATAAGTGGGCTTATTGGCTTATTAACGTTTGGGGGCAGTTAAAA ATTACCGACTATAATTATTTAAAATTGAAGCTACTTGCCTCTCTTCTCAGTCCGGTTATTATTGTTATAA TATTTTACATTAAAAATTTTGAAAGAATAAAATCATTACAATTTTTCAAACAAGATGAAAAAGTATATGG AGATGCAAGCTGGGCTAATCCGTCAGATATAGAGGCTGCAGGTCTTAGATCTAAGAAAGGTATGCTGATC GGTGTTGATGCCGGTGGATATTTTGTTGCAGACGGGTTCCAGCATGCTTTATTATTTGCTCCTACCGGTT CAGGTAAAGGTGTAGGGTTTGTGATACCTAATTTGTTATTTTGGAGTGATTCGGTAGTAGTGCATGACAT AAAGCTTGAAAATCACGGGTTGACAAGTGGTTGGCGTGAGAAGCAAGGGCAGAAAGTTTTTGTATGGGAG CCTTCTAATCCTGATGGTGTTACTCATTGTTATAATCCGATTGATTGGGTTAGTACTAAGCCTGGGCAAA TGGTTGATGACGTTCAAAAAATTTCAAATCTTATAATGCCGGAAAAGGATTTTTGGAATAATGAGGCACG AAGCTTATTTTTAGGTGTAACTCTATATTTAATAGCCGATCCTACTAAAACTAAATCTTTCGGTGAAGTA GTGCGTACTATGAGGAGTGACGACGTAGTTTATAATCTAGCGGTCGTACTCGATACGCTTGGTGGTGTAA TACATCCTGTTGCATATATGAATATTGCTGCATTTTTGCAAAAAGCCGATAAAGAGCGTTCCGGCGTAAT ATCTACAATGAACTCATCGCTTGAATTATGGGCAAATCCACTGATTGATTCAGCTACAGCATCTTCTGAT TTCAATATACAAGAATTTAAAAAAGTCAAAACAACCGTATATGTAGGGTTAACACCCGATAATATACAGC GTTTACAAAAATTAATGCAGGTGTTTTATCAGCAGGCGACAGAATTTTTAAGCCGCAAAATGCCGGATTT AAAGGAAGAGCCGTATGGAGTAATGTTCTTACTTGACGAGTTCCCGACGCTCGGGAAGATGGATACTTTT AAAGCCGGTATAGCTTATTTTAGAGGTTATAGAGTTCGTTTATTTTTAATTATCCAAGATACACAGCAGT TAAAAGGAACATACGAAGATGCAGGGATGAATTCTTTCTTATCTAATGCAACATATCGTATTACTTTTGC CGCTAATAACTATGAAACGGCAAATTTAATATCGCAGCTTGTCGGTAATAAGACGGTAGAACAAAGATCA TTTAGTAAACCTTTATTTTTTGATCTTAATATTGCTACTAGAACCCAAAACGTTTCTCAGGTTCAAAGAG CTTTACTTTTACCTCAAGAAGTAATACAGTTACCGAGAGATGAGCAAATTGTTTTAATAGAATCCTTTCC GCCTATAAAATCGCGTAAAATTAAGTATTATGAAGATAAGTTTTTTACTAGTAGATTATTACCGCCGACT TTTGTACCTACTCAAGTACCTTTTGACCCTAGGGCAAATAATAATGGGGCTTCGGAAGAGACCGAAACAA TAACTGTTCCGGAAAATAATGAGTAA |