Detailed information    

insolico Bioinformatically predicted

Overview


Name   hexB   Type   Machinery gene
Locus tag   ELZ51_RS10655 Genome accession   NZ_LR134094
Coordinates   2118817..2120799 (-) Length   660 a.a.
NCBI ID   WP_126427650.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2113817..2125799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS10630 (NCTC4669_02241) cinA 2114671..2115942 (-) 1272 WP_126427494.1 competence/damage-inducible protein A Machinery gene
  ELZ51_RS10635 (NCTC4669_02242) - 2116066..2116406 (-) 341 Protein_2051 VOC family protein -
  ELZ51_RS10640 (NCTC4669_02243) - 2116409..2116981 (-) 573 WP_126427496.1 DNA-3-methyladenine glycosylase I -
  ELZ51_RS10645 (NCTC4669_02244) ruvA 2116991..2117584 (-) 594 WP_003053113.1 Holliday junction branch migration protein RuvA Machinery gene
  ELZ51_RS10650 (NCTC4669_02245) - 2117586..2118806 (-) 1221 WP_003053115.1 MDR family MFS transporter -
  ELZ51_RS10655 (NCTC4669_02246) hexB 2118817..2120799 (-) 1983 WP_126427650.1 DNA mismatch repair endonuclease MutL Machinery gene
  ELZ51_RS10660 (NCTC4669_02247) - 2122082..2125312 (+) 3231 WP_126427498.1 serum opacification factor -

Sequence


Protein


Download         Length: 660 a.a.        Molecular weight: 74433.78 Da        Isoelectric Point: 5.2934

>NTDB_id=997789 ELZ51_RS10655 WP_126427650.1 2118817..2120799(-) (hexB) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MSKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQVTIDIEESGLKKIQITDNGEGMSSEDLPLSLRRHATSK
IKNQSDLFRIRTLGFRGEALPSVASISKITIKTATKEAAYGSLLIATGGEIETLEETSTPVGTKIKVENLFYNTPARLKY
MKSLQAELAHIVDVVNRLSLAHPEIAFTLISDGRQLTQTSGTGDLQQAIAGIYGLNTAKKMIPISSADLDFEVSGYVSLP
ELTRANRNYMTILINGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKERELMALIST
AISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPLQSKGLYYDPQKNDFFVKESDVSEKLPESNFHDTEIDKTVKDQR
TEQFPDLGENTGFSSVKRASRSQDEVTDADHPGFDLKNKQKLSQMLTRLENEEQSVFPELDYFGQMHGTYLFAQGKDGLF
IIDQHAAQERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVGIFLEVYGHNTFILREHPIWMKEE
EIASGVYEMCDMLLLTNEVSIKTYRAELAIMMSCKRSIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADM
EKMFRRIQENHTSLRELGKY

Nucleotide


Download         Length: 1983 bp        

>NTDB_id=997789 ELZ51_RS10655 WP_126427650.1 2118817..2120799(-) (hexB) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATATCAAAAATTATTGAATTACCAGAAGTTCTCGCCAACCAAATTGCAGCTGGTGAAGTTGTAGAAAGGCCAGCGAGTGT
TGTCAAGGAATTGGTTGAGAATGCTATCGATGCTAAGAGTAGCCAAGTCACCATTGATATTGAAGAGTCTGGTCTCAAAA
AGATACAGATTACGGACAATGGTGAAGGGATGTCATCTGAAGATCTCCCTTTGAGCTTGCGGCGACATGCGACCAGTAAA
ATCAAAAATCAGAGTGATCTCTTTCGAATTAGAACGCTTGGTTTTAGGGGAGAAGCTTTACCATCGGTTGCTTCTATCAG
CAAAATTACGATAAAAACAGCTACTAAGGAAGCTGCTTATGGCTCTCTACTAATTGCAACTGGTGGAGAGATTGAAACGC
TTGAGGAAACCTCGACGCCTGTAGGTACCAAGATTAAGGTTGAAAACCTTTTTTATAATACACCTGCTCGCCTCAAATAC
ATGAAAAGTTTACAGGCAGAGTTAGCTCATATTGTTGATGTGGTTAATCGTTTGAGTTTGGCTCATCCAGAAATTGCTTT
CACCCTGATTAGTGATGGCCGTCAATTAACTCAGACGTCAGGGACGGGAGATCTTCAGCAGGCTATTGCGGGCATTTATG
GCTTGAATACTGCGAAGAAAATGATTCCTATTTCCAGTGCTGATTTGGACTTTGAAGTGTCGGGCTATGTCAGTTTACCA
GAGTTGACACGCGCCAACCGCAATTATATGACTATTTTAATCAATGGACGCTACATTAAAAATTTCTTGCTCAATCGGGC
TATTTTAGATGGTTATGGCTCTAAGTTGATGGTTGGACGTTTCCCAATTGTTGTGATTGATATTCAGATTGACCCCTATT
TGGCCGATGTCAATGTTCACCCTACTAAGCAAGAGGTCCGTATTTCAAAAGAGCGTGAGTTAATGGCTTTAATTAGTACC
GCGATTTCTGAAAGTCTTAAGGAGCAAGATTTGATTCCAGATGCTCTGGAGAACTTAGCTAAATCAAGCACACGACACTT
TTCTAAACCAGAGCAAACACAACTTCCATTACAATCTAAAGGGCTTTATTATGATCCTCAAAAGAATGATTTTTTTGTCA
AAGAATCAGACGTTTCTGAAAAACTGCCTGAGAGTAATTTTCATGATACAGAGATTGACAAGACTGTAAAGGATCAAAGG
ACGGAGCAGTTTCCTGATTTAGGAGAGAATACAGGATTTTCCTCAGTAAAACGTGCTAGTCGATCACAGGATGAGGTAAC
TGATGCTGATCACCCTGGATTTGATTTGAAAAACAAACAGAAATTATCTCAAATGCTAACCCGTTTGGAAAATGAAGAGC
AATCGGTATTTCCTGAATTGGATTATTTTGGTCAGATGCACGGCACTTATCTCTTTGCTCAGGGAAAAGATGGTTTATTT
ATCATTGACCAACACGCTGCCCAAGAGCGGGTTAAATACGAATATTATCGTGATAAGATAGGTGAAGTTGACAGTAGTTT
ACAGCAATTGTTGGTGCCCTATTTGTTTGAGTTTTCCGGCTCGGATTTCATTAATTTACAGGAGAAAATGGCACTCTTAA
ATGAAGTTGGCATCTTTCTGGAAGTGTATGGGCACAATACTTTCATCTTGAGGGAGCATCCTATCTGGATGAAAGAAGAA
GAGATTGCATCTGGTGTCTATGAAATGTGTGACATGTTACTTCTAACCAATGAGGTATCTATCAAAACTTACCGAGCAGA
GTTAGCTATTATGATGAGTTGTAAACGATCTATCAAGGCAAATCATAGCTTGGATGATTATTCAGCAAGAAATCTGCTGC
TGCAATTGGCGCAATGTCAAAATCCTTATAACTGCCCTCATGGTAGACCCGTGTTGATTAATTTCAGTAAAGCAGATATG
GAAAAAATGTTCCGTCGTATCCAAGAAAATCATACTAGCCTGCGAGAACTAGGAAAATATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexB Streptococcus pneumoniae R6

67.976

100

0.682